Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U596707 in the current build, Tomato 200607 #2

Unigene SGN-U334159

Unigene Basic Information

Unigene ID:	SGN-U334159
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	334159
mRNA sequence:	Length: 534 bp

>SGN-U334159 Tomato 200607 #1 (1 members)
GCTATAATTTTTCAAAAAAGCTTCAAGGAATGGCCAAGACTAATGGATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGA
TGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAGGGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTG
GTTTATGGTGCTCAGTATTAGGGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCAT
TTTGGAATCGTACCACAAAGCCTTCTTTGGTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTT
CTCGAAAAAATGCATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGGGCTTCCATCACTACATCTAAAATTTGATTTACCACCTC
CATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAGGTGAGACAGAAGAAGAGTACTCAACTAGGTTGG

[Blast] [AA Translation]

Associated Loci (2)

Locus symbol	Locus name	Gene activity
virp2	viroid RNA-binding protein
GABA-TP2	Gamma aminobutyrate transaminase isoform 2	gamma aminobutyrate transaminase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E323584
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101610	Aminotransferase class-III - Molecular Function: transaminase activity (GO:0008483) - Molecular Function: pyridoxal phosphate binding (GO:0030170)	60
2	119140	Aminotransferase class-III - Molecular Function: transaminase activity (GO:0008483) - Molecular Function: pyridoxal phosphate binding (GO:0030170)	20
5	129552	Aminotransferase class-III - Molecular Function: transaminase activity (GO:0008483) - Molecular Function: pyridoxal phosphate binding (GO:0030170)	19

Preceding Unigenes (1)

Unigene	Build
SGN-U232384	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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