Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U600185 in the current build, Tomato 200607 #2

Unigene SGN-U343474

Unigene Basic Information

Unigene ID:	SGN-U343474
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	343474
mRNA sequence:	Length: 1675 bp

>SGN-U343474 Tomato 200607 #1 (1 members)
AATTTTAAAGTGTGAAGCAGTGTTTACTTACTTCACAATGGAGACACCGTTGCTGAATGGCTACTCCGGCTCCGGCGAACGCAACGACCT
TATCGGGGCGGACGGGGACTACCGTCCGGCGAAAAGTACAAAGGATTGGTGGGCAATTTTCTGTGTGGAGACATTGAAACTGTGGAGAAT
TGGAGGTCCTATAGCATTCAACATAATCTGCCAATATGGAGTGAATTCTCTTACAAATATATTTGTTGGACATCTTGGAAATGTTGAGCT
CTCTGCTATTTCTATTGCTCAGACTGTTATTAGTACTTTTTCTTTTGGCTTCATGATGGGAATGGGTAGTGCATTGGAGACACTATGTGG
CCAGGCATATGGAGCAGGGCAAGTTCACATGTTGGGCGTTTATATGCAACGATCCATCATAATCCTGCTAGCTACTTGTGTCTTTCTATT
GCCCATTTACTTATTCACCACTCCACTTCTCGTGTTGCTAGGCCAAGAAACTGCAATAGCGGACCTCTCTGGAAGATATACCATGTTACT
CATCCCACAGTTGTTTTCACTTGCTATCAATTTTCCTACTTCCAAATTTCTTCAAGCTCAGAGTAAAGTGGATGTTCTCGCTGGGATTGG
ATTCGCAGCTGTGCTGGTGCACGCTTTGTTCCTCTGGCTCTTTATATATACACTTGAATGGGGTACTAATGGTGCTGCTATAGCCTTTGA
CCTCACGAATTGGCTTACTGCGATGGCTCAATTAGCATACGTTGTTGGATGGTGTAAGGATGGGTGGAAAGGGTTGTCGTGGTCAGCGTT
CAATGAGATTTGGGCATTCGTGAGACTTTCTATTGCTTCAGCTGTTATGTTATGCCTTGAGATTTGGTACATGATGAGTATTATTCTCCT
TGTTGGCCATCTTAACAACGCCGTCATAGCAGTTGGCTCCATTTCAATTTGTATGAACATCAATGGATGGGAGAGCATGCTTTTCATTGG
AATTAATGCTGCCATAAGCATCCGAGTCTCAAATGAACTGGGGCAAGGACATCCAAGAGCTACCAAATACTCGGTCTACATCACGGTGTT
TCAGTCCCTCCTAATAGGGATACTCTGCATGGTAATTGTACTAGTAGCTAGAGATCATCTGGCCATTATCTTTTCAAACAGCAAGGAGAT
GCAAGAAGCTGTTGCTGATCTTGCTTACCTTCTAGGGATTACCATGGTCCTTAATAGCGTTCAGCCGGTTATATCAGGGGTTGCTGTTGG
AGGTGGATGGCAAGCTTTAGTAGCTTATATCAATCTTGGTTGCTATTATGTTTTTGGACTCCCTCTTGGATATCTTCTTGGTTATGTAGC
AAAATTAGGAACAAAGGGACTTTGGTTAGGGATGATAGCAGGGGCAGCTTTGCAGACTCTTCTACTCTTGATTATACTGTATAAGACTAA
CTGGAACAAGGAGGTTAACGACACGACGGAGCGTATGCGCAAGTGGGGAGGTCAAGATTTTGAGACACAGAAATCTGCAGATGGGCAGTT
AACTATTGAGAATGGTGGTGTTGCTTAAGTTTATGATTGATTCATTGAAATAATGTATTTTTTCTTGTTTATGTTTGAGTTTGAAACTTG
TAAAATCTGTTTCTTTTGTTATACACTCAGCAATAGAAACGTGGGTTTTCCAATT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY348872	anthocyanin permease	anthocyanin permease

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E747480
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101440	Multi antimicrobial extrusion protein MatE - Biological Process: multidrug transport (GO:0006855) - Molecular Function: drug transporter activity (GO:0015238) - Molecular Function: antiporter activity (GO:0015297) - Cellular Component: membrane (GO:0016020)	159
2	118445	Multi antimicrobial extrusion protein MatE - Biological Process: multidrug transport (GO:0006855) - Molecular Function: drug transporter activity (GO:0015238) - Molecular Function: antiporter activity (GO:0015297) - Cellular Component: membrane (GO:0016020)	137
5	128951	Multi antimicrobial extrusion protein MatE - Biological Process: multidrug transport (GO:0006855) - Molecular Function: drug transporter activity (GO:0015238) - Molecular Function: antiporter activity (GO:0015297) - Cellular Component: membrane (GO:0016020)	134

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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