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Solanum lycopersicum mRNA Solyc01g088200.2.1

mRNA details  
Name
Solyc01g088200.2.1
Type
mRNA
Length
4,273
Organism
Solanum lycopersicum
Description
Aldehyde oxidase (AHRD V1 ***- Q9FV24_SOLLC); contains Interpro domain(s) IPR002346 Molybdopterin dehydrogenase, FAD-binding
Location(s)
SL2.50ch01:83045807..83053778
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0055114
  • GO:0050660
Length
7972
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g088200.2.1 Aldehyde oxidase (AHRD V1 ***- Q9FV24_SOLLC); contains Interpro domain(s) IPR002346 Molybdopterin dehydrogenase, FAD-binding

CTCGTCTCCATTACTTATTCTCTCAATTTCCTAAAGTACACACTTGAAAGCCATCTATCATAATTTTAAACTGAAGGGAAGATTTCATCTTTAATTTTGAATTATGACACAAAACTAATGGGGAGATTTCATCTTTAGTTTTGAATCAAAGTGTGCCGCACTGTGCAGACACGATATGCTTAACATCTGTGTTGTTTGACTTTATTTGTGAAAAAGCATTAGAGGCCTTCATCAGGTGGTTGTGGGGCTTGTGTCGTTCTGGTATCAAAGTATGATCCAAAGCTTAAAAAGGTTGAAGATCTTAGCGTAAGTTCATGCCTTACACTTCTTTGCAGTTTAAATGGTTTTTCAATTACTACAAGTGAAGGTCTTGGGAACACCAGAGATGGTTTCCACTCTATTCATGAAAGGATTGCCGGTTTCCATGCTTCTCAATGCGGCTTTTGCACTCCCGGCATGTGTATGTCATTTTTCTCCGCTCTTGTCAACGCCGATAAAGGAAACAAGCCAGATCCTCCACCGGGATTCTCTAAGCTTAATTCGTCCGAAGCTGAAAAGGCCATAGTAGGGAACCTTTGTCGGTGTACTGGATACCGGCCCATTGCTTATGCCTGCAAGTCTTTTGCTGCTGATATTGATATAGAGGATTTGGGGCTCAATTCTTTTTGGAAAAACGGAGATTCCAAGGAAATGAAAGTAAGTAAATTACCTCCCTATGATCCAAACAAGAATTTAAGTACATATCCCAAGTTCTTGAAAAGTGAATCTGCCACGATTTTGGACTCCTCAAGGTACCCTTGGTACAGTCCTGTTTCCATTGAGGAGCTACGGAGCTTGTTGTACTCCAATGTGACGGAAATTGGTACAAGCTTTAAACTTGTCATTGGTAATACTGGCAGTGGTTATTATAAGGAAACTCAACGATATGATCATTACATTGATCTCAGGCATGTTCCTGAACTCTCAATAATCAAAAGAAATCAAACAGGCATTGAAGTCGGAGCAACTGTGACTGTCTCTACATTCATTTCTTTCTTGAAAGAGGAAAGTAAAATCAATTTTGGTTCATATGGAAAGTTGGTGTCTGATAAACTGGCTTACCACATGGAGAAGATTGCTTCACCATTTGTGAGAAACTCTGCTAGTGTGGGAGGAAATTTGGTTATGGCACAGAAGAATGGTTTTCCTTCAGATATTGCTACATTATTTCTCGGGCTTTGTGCTACTGTTAGCTTGATAACTGGACATGGATTTGAAAACCTCACATGGGAAGAGTTACCATTGAGACCACCACCAGACTCGAGGACTGTACTTCTAACTGTTTCTATCCCATTTAAGAAAGATCAAAATTCTAAATTTTTGTTTGAAGCCTATCGAGCTGCTCCACGACCTTATGGAAATGCATTGGCATATATAAATGCTGCTTTCCGGGCTGATGTTTCTCTCTGCCAGAACAGCTTCAGGATAAACAATATCCGGTTGGCATTTGGTGCTTATGGCACTAAATATGCAACAAGGGCTAAAAAGGTAGAGAAATATCTAACTGGGAAAATGTTAAACGTACATATTTTATATGAAGCACTAAAATTAATCAAACTAGCAGTGGTACCGGAAGATGGCACTTTGCACCCTGAGTACAGATCAAGCTTGGCTGTCAGTTTTGTTTTTGAGTTTCTTTATCCCTTAACTGATGCTCATTCTGTTATTTCTGGTGGCTTACACAATGGAATTAATGACATCTCAGTCGAGGAAGTCTTCAAAAGTAGTAAAGATGGATGCATCAGTCAGGGGAAAAAACAAACACTACTGTTTTCTGCTAAGCAGGTTATGGAATCTAGTACTGAGTACTATCCAGTAGGTGAACCGATGATGAAGGTCGGACCTGCCATGCAAGCTTCTGGTGAAGCTGTTTATGTAGATGACATCCCTTCACCACCAAACTGCCTACATGGAGCATTTATCTACAGTAGAAACCGTTAGCTGGTGTAAAAGGAATCCAGCTCAAGTCTAATCAATTAACAAATGGAGTCACCGAGGTTATAACTTGTAAAGATATCCCAAGTGGAGGGGAAAATGTAGGAGTTATTACAAGGTTTGATCCTGAGCCCTTATTTGCAGATGATCTCGTCCGATGCGTAGGTGACAGAATCGCAATTGTGGTTGCTGACAGTCAGAGGTCTGCTGATGTGGCTGCAAGAACGGTCCTTGTTGAATACGATACTGATGATATAGATTCACCCATTTTAACCGTCGAGGATGCTGTTGAAAAATCTAGCTTTATCAAAATCTCACCATTTCTGTATCCAAAACAAGTCGGTGATTTCTCGAAAGGAATGGCTGAAGCTGATCACAAGATTTTCTCTGCTGAGGTAAGACTTGGTTCCGAGTACTATTTTTATATGGAGACACAGACTGCCCTAGCAATTCCAGATGAAGACAACTGCATGGTTGTTTATACTTCAAGCCAGTGCCCTGAGAGAGCACAATATATGATCGCCACTTGTCTTGGTATTCCTGAACACAGTATCCGTGTAATTACCAGAAGAGTCGGAGGTGGCTTTGGGGGCAAGGCAATCAAATCAATGCCAATCTCTGCAGCCTGTGCACTTGCAGCATACAAGTTAAGGCAACCTGTCAGGATATATGTCAACCGGAACAGTGACATGGTAATGACAGGAGGAAGACACCCAATGAAAGTAACATATAGTGTAGGATTCAAGTCGAGTGGAAAGATCACAGCATTGCATCTTGATCTATTGATAAATGCTGGGATCTCGGACGATGTAAGTCCCACCATACCATTAAATGTGATTAAAGCACTAAAGAAATATGATTGGGTGCCTTATCTTTCGATGTAAAACTATGCAAGACAAGTCTTACTAGCAAATCGGCTATGCGGCCCCCTGGGGAGGTGCAGGGATCTTATATTGCCGAAGCTATAATAGAACATGTATCAAGTTCACTGTCGATGGAGGTGGACTCGGTCAGAAATAAAAATGTTCATACATTTGAAAGTCTTAATTTGGTCTATGATAACATTGTATCAGTAGGAGAATATACAATGCCTAGTATCATGGATAAGTTGGCTGTGTCCTCAAACTTTTTTCAACGTAGCAAGATGATAGAACAGTTCAACCAGAAAAGCACATGGAAGAAAAGGGGTATCTCCCGAGTACCAATCGTGTATTAAGCTATAGAACAATCGAAACCAGGAAAAGTCAGTATTCTGCAAGACGGATCAATTGTTGTAGAGGTAGGAGGGATTGAGATTGGCCAAGGGTTATGGACAAAGGTTAAGCAGATGACTGCCTATTCTCTTGGTTTAATCGAAAGCAGTTGGGCCGAAGAACTTGTGGAGAAAATACGAGTCATACAAGCAGATACCTTAAGCATAGTGCAAGGTGGGTATACAGCTGGGAGCACTACATCGGAATCAAGTTGTGAAGCTGTTAGACTTTGCTGTAATGTCTTGGTTGAAAGGTTGAGTCCTCTTAAGAAAAAGTTACAGGAACAAAATGTCTCTGTTGATTGGCCAACACTGATTCGCCAGTTCTGTCCCTCCACCCCCTTCTTTTTGCAGGCACAAATGGAATCAGTAAACTTAGCAGCAAATTCTTATTATGTACCAGAATCTGATTTTACGAGTTATTTGAACTTTGGTGCTGCTGTCAGTGAGGTGGAGATTGATATCCTGACCGGAGAGACTACCATTTTGCAATCTGATATTATTTACGACTGTGGGCAGAGCTTGAATCCAGCCGTTGATATGGGACAGATTGAAGGGGCTTTCGTTCAAGGAATCGGATTTTTCATGAACAAAGAGTATCTTACAAACGAAGATGGGTTAATGGTCTCGAATAGTACATGGACATACAAGATCCCAACAATTGACACCATACCTCGAAATTTCAATGTTCATGTGGTAAACAGAGGACACCACGAAAAACGTGTTCTCTCCTCTAAAGCATCTGGTGAGCCACCGTTGCTTCTGGTAGTCAGCGTCCATTGTGCAGCACGAGCAGCGGTTAAAGCAGCACGTGAACAGCTCAAACAATGGGACAAGCTTGACGGGTCTGTTTCAGAATTCTATCTGGACGTCCCCGCCATATTACCCGTTGTGAAGACACAACGGTTAAATATTGTTTTTCTTTAAATCTTCTTATTAAAAGAATAAGTTTCTTTTGTTTTTCTGTCAATATCAAACCTCAACGTATATTTTTGATCGTTTAGCAATAAAAATAACGTTGTAAAGATTAAATTAGGTGGAATGTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g088200.2.1SL2.50ch01:83047127..83049168508+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g088200.2SL2.50ch01:83045807..830537787,972+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g088200.2.1.1SL2.50ch01:83045807..83046041235+n/a
exonexon:Solyc01g088200.2.1.10SL2.50ch01:83053471..83053778308+n/a
exonexon:Solyc01g088200.2.1.2SL2.50ch01:83046907..830485711,665+n/a
exonexon:Solyc01g088200.2.1.3SL2.50ch01:83049089..83049347259+n/a
exonexon:Solyc01g088200.2.1.4SL2.50ch01:83049450..83049659210+2
exonexon:Solyc01g088200.2.1.5SL2.50ch01:83050001..83050219219+n/a
exonexon:Solyc01g088200.2.1.6SL2.50ch01:83050344..83051305962+n/a
exonexon:Solyc01g088200.2.1.7SL2.50ch01:83052217..83052342126+n/a
exonexon:Solyc01g088200.2.1.8SL2.50ch01:83052811..8305290999+n/a
exonexon:Solyc01g088200.2.1.9SL2.50ch01:83053037..83053226190+n/a
intronintron:Solyc01g088200.2.1.1SL2.50ch01:83046042..83046906n/a+n/a
intronintron:Solyc01g088200.2.1.2SL2.50ch01:83048572..83049088n/a+n/a
intronintron:Solyc01g088200.2.1.3SL2.50ch01:83049348..83049449n/a+n/a
intronintron:Solyc01g088200.2.1.4SL2.50ch01:83049660..83050000n/a+n/a
intronintron:Solyc01g088200.2.1.5SL2.50ch01:83050220..83050343n/a+n/a
intronintron:Solyc01g088200.2.1.6SL2.50ch01:83051306..83052216n/a+n/a
intronintron:Solyc01g088200.2.1.7SL2.50ch01:83052343..83052810n/a+n/a
intronintron:Solyc01g088200.2.1.8SL2.50ch01:83052910..83053036n/a+n/a
intronintron:Solyc01g088200.2.1.9SL2.50ch01:83053227..83053470n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17687768%2Fdetails feature 17687768
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