Solanum lycopersicum mRNA Solyc01g099760.2.1

mRNA details  
Name
Solyc01g099760.2.1
Type
mRNA
Length
1,691
Organism
Solanum lycopersicum
Description
26S protease regulatory subunit 6A homolog (AHRD V1 ***- PRS6A_SOLLC); contains Interpro domain(s) IPR005937 26S proteasome subunit P45
Location(s)
SL2.50ch01:89907447..89912465
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005524
  • GO:0005737
  • GO:0017111
Length
5019
Nb exon
9
Sifter term
GO:0004175
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g099760.2.1 26S protease regulatory subunit 6A homolog (AHRD V1 ***- PRS6A_SOLLC); contains Interpro domain(s) IPR005937 26S proteasome subunit P45

GGCATCGAAAAAGAAGAGAATATAAAGCTTTCCGACTATACAAGGTTACACAGATCGACTCCACTCCAATTTCATTTCGGAATCCCATACAAACAATCTTGTCGACGATGGCAACGCCGATGGCTGAGGATAGCAACTTCGAAGATGACCAGCTCCATGCTATGTCCACTGAAGATATTATTAGGGCTTCTCGCCTTCTTGACAATGAAATTCGAATCATAAAGGAAGAGCTGCAGAGGACGAATCTAGAGTTGGATTCATTCAAGGAGAAGATAAAGGAGAACCAAGAAAAAATTAAGCTCAATAAGCAACTTCCTTACTTGGTCGGCAACATTGTTGAGATTTTGGAAATGAATCCTGAAGAAGAAGCTGAGGAGGATGGTGCAAATATTGATCTCGACTCACAAAGGAAGGGCAAGTGTGTTGTACTGAAAACATCCACACGCCAGACAATTTTCTTGCCTGTTGTTGGTCTTGTTGATCCTGACAACTTAAAACCTGGTGATCTGGTTGGAGTAAATAAAGACAGTTATTTGATATTGGACACCTTGCCATCTGAATATGATTCTCGGGTAAAGGCAATGGAAGTTGATGAAAAGCCAACTGAAGACTACAATGATATTGGAGGCTTGGAGAAACAGATTCAAGAACTTGTCGAGGCAATTGTGCTGCCTATGACACACCAAGAACGGTTCCAGAAATTAGGTGTTCGTCCTCCAAAGGGAGTCCTTTTGTATGGGCCTCCTGGGACTGGGAAAACCCTGATGGCCAGAGCCTGTGCTGCACAAACAAATGCTACTTTTCTCAAGTTAGCGGGACCTCAGCTTGTGCAGATGTTCATTGGAGATGGAGCAAAACTTGTTCGTGATGCTTTCCAGCTGGCAAAAGAGAAATCACCTTGCATAATTTTCATTGATGAAATTGATGCTATAGGCACAAAGCGTTTTGATAGCGAAGTTAGTGGGGATCGAGAGGTCCAACGAACTATGTTGGAGTTACTTAACCAGCTCGATGGTTTTAGCAGCGATGATCGGATTAAGGTGATAGCAGCAACAAACAGAGCTGATATTTTGGATCCTGCTTTGATGCGATCTGGTCGTTTGGATCGTAAAATCGAATTCCCCCACCCCACAGAGGAAGCCAGGGCTCGGATCCTGCAGATCCATTCCAGAAAGATGAATGTCAACCCAGATGTTAACTTTGAAGAATTGGCTCGGTCGACAGATGATTTTAATGGGGCACAGTTGAAAGCTGTATGTGTTGAGGCAGGCATGCTAGCACTCCGTCGCGATGCCACTGAGGTAACTCATGAAGACTTCAATGAAGGTATCATTCAAGTTCAAGCCAAGAAGAAAGCCAGCTTAAACTACTATGCCTAAACTTTCTGCAGGCCCCATGGCAAGCAGCTTTTAGCTTTTCGAAGTTGAAGATGGCTACTGCCTGCCACACCCCCGAACTCCTTTTAGTATCCCTCTTCTTTCTTTCTGTGCGGGTAGGGGGTGGGGATAGAAGCTTTGCACATTAGCGTCTGTTCTGTGGATTACTGATATCAAAGGAGGTGTCTGGTAGTATGTGGATCTCTTCTTGAATTTGTTCAGCTGTATACTTTCCTGCTGTATGACTTAATGACCTAGAATAGCCTTGTGCTATATTGGCAATCGAAACTTTATCGTTAATTTTGGACAATAGCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g099760.2.1SL2.50ch01:89907553..89912153424+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g099760.2SL2.50ch01:89907447..899124655,019+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g099760.2.1.1SL2.50ch01:89907447..89907670224+n/a
exonexon:Solyc01g099760.2.1.2SL2.50ch01:89907814..89907930117+n/a
exonexon:Solyc01g099760.2.1.3SL2.50ch01:89909518..89909625108+n/a
exonexon:Solyc01g099760.2.1.4SL2.50ch01:89909829..89910212384+n/a
exonexon:Solyc01g099760.2.1.5SL2.50ch01:89910805..89910923119+n/a
exonexon:Solyc01g099760.2.1.6SL2.50ch01:89911121..8991120888+n/a
exonexon:Solyc01g099760.2.1.7SL2.50ch01:89911416..89911535120+1
exonexon:Solyc01g099760.2.1.8SL2.50ch01:89911652..89911792141+n/a
exonexon:Solyc01g099760.2.1.9SL2.50ch01:89912076..89912465390+n/a
intronintron:Solyc01g099760.2.1.1SL2.50ch01:89907671..89907813n/a+n/a
intronintron:Solyc01g099760.2.1.2SL2.50ch01:89907931..89909517n/a+n/a
intronintron:Solyc01g099760.2.1.3SL2.50ch01:89909626..89909828n/a+n/a
intronintron:Solyc01g099760.2.1.4SL2.50ch01:89910213..89910804n/a+n/a
intronintron:Solyc01g099760.2.1.5SL2.50ch01:89910924..89911120n/a+n/a
intronintron:Solyc01g099760.2.1.6SL2.50ch01:89911209..89911415n/a+n/a
intronintron:Solyc01g099760.2.1.7SL2.50ch01:89911536..89911651n/a+n/a
intronintron:Solyc01g099760.2.1.8SL2.50ch01:89911793..89912075n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17698485%2Fdetails feature 17698485
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