Solanum lycopersicum mRNA Solyc02g084700.2.1
 mRNA details
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| Name | Type |
Length
2,247
|
Organism |
|
Description
MORC family CW-type zinc finger 3 (AHRD V1 *--- Q4VBZ9_HUMAN); contains Interpro domain(s) IPR003594 ATP-binding region, ATPase-like
|
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Location(s)
SL2.50ch02:47798406..47812303
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005524
- Length
- 13898
- Nb exon
- 18
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc02g084700.2.1 MORC family CW-type zinc finger 3 (AHRD V1 *--- Q4VBZ9_HUMAN); contains Interpro domain(s) IPR003594 ATP-binding region, ATPase-like
AGATTTGAGTATTAAAAAGGCAGACTAAACAGACTTTAGACAGTAGTCTTGCAAAACCCTCAAGATTGAAGAAACCTCTAAGTGATCAAAGGATCACTGATTTCTTCGCATCTAATTCTTTCGAAATGCCGCCTAAGGTAGAGAAGCTTCCAATTAATGTCGTCGAACTCGACAGTAGCGACGACGAGGGCACCGGCGTTCCCGTCGTCGGGATGACAAAACCAGAAATTAATCACGGTGGTAACTCACTGAGTAAATCACCGGTAATAGAAAATCCCAACGCCGTTGTTCCACCGGATTCTAATTACAGGCCACTGGATTCTCGAAGTTTCTGGAGAGCTGGCAATTTTGAAGTTGGTCGTATCAAATCATCTGCTATACACGGTGAATTGGAACATGCTCGTGTTCATCCCAAATTTCTGCATTCCAATGCTACTTCTCATAAATGGGCGTTTGGAGCAATAGCTGAGCTTTTGGACAATGCTGTTGATGAGGTAAGTAGTGGCGCAACATTCGTGAAAATTGACAGAATCTCTAACCCAAGGGACAACTCTCCTGCATTGCTCTTCCAGGACGATGGGGGTGGTATGGATCCAGACCGCCTTCGCAAATGCATGAGCCTGGGTTATTCTTCAAAAACATCAAACTCAACAATTGGACAATATGGTAATGGATTCAAGACGAGCACCATGCGGTTAGGCGCTGATGTAATTGTCTTCAGCCGTTCATCCCGTTCAGGCCGAGCAACTCAAAGTGTTGGCCTTCTGTCCTATACATTTCTTCGGAGAACAGGGCAAGATGATGTGATTGTTCCAATGATCGATTATGATATCACCGGCCATTGGGCTGAACCAATAGTATATGGCTCTCAAGATGATTGGTCAACAAATTTGAATACAATTCTTGAGTGGTCCCCTTTTGCAACAAAATTGGATCTTCTGCAACAGTTTGATGATATAAAATCACATGGAACTAGGATTATTGTCTTCAACCTATGGCTAAACGATGAAGGCATTTATGAACTGAACTTTGATGACGATGATGAGGACATAACGTTGAGAGATGAAGCTAATCATGGAAATACATCAAAAACGAACAAGAGAGGGCGTGAACTGCAATCCCATATTTCGTACCGTTTACGATACTCTCTAAGAGCATACACATCCATATTATACCTCAAAAAATTTACAAATTTTAGTATCATACTAAGAGGGAAGCCTGTTGAGCAGTATAATATTCTTGATGAGTTGAAGCTCACAAAAGTAATCACTTACAGGCCGCAACTTGCTGGAACATCAAAGGAGATCTTGGTTGAAACAAGTCTTGGCTTCGTCAAGGATACTCCATCATCAGTTTGTGGATTCAATGTTTACCACAAAAATCGCCTCATCAGGCCATTCTGGAAAGTTACTGCAGACGGTTCTTCCAAAGGAAATGGTGTTGTTGGTGTTCTGGAAGCAAATTTCATAGAACCTGCACATGACAAGCAAGATTTTGAACGATCTTCTCTGTTTTTCAAGCTGGAGACTAAACTAAAGCAAATAGTGATGGATTACTGGAAAGGTCATTGTCACTTGATAGGATTGAAGCCTCTTGAACCGCATTTACAAAACCTTCTGAGAGAATCTTTTGTTCCACCCCAAGTTCAAGTGGCTAATGCTCAAACACCGTCGCCAACAAAATTTCAAACAGTTACAGATCTTGCAGCTCATCCCAGGCCACATCTCCGTTCTGCACAGAGTGGCAACAGTAGAAGAACCAACTGCAACATGGAATTGCCAGGTGTACAGCCTATGACAGGGAATGCAACTGAGTCTGTTAAAAAAGATACACAAATATCCAGTTCAAGTTGCATGTCAATTGATCAGATTTGTGAAGAAAATATCCAACTCTTTAGGAGGTGTGAATCATTCATCCAGAGAGAAACCGAGTTGAAACGTACAATAGAGGAGCTGGAGAAAGAGTTAGAGGACACTAAAAAGAAAACTTCCGAGCTTTCGACGCGTCTGGAAAGTCAGAAAAAGCTTAAACTTTTGAAACAACTTGGACAGAAAGCATAGTAAAGTTTTTATTCTCTTGTGAATTGTATGCATCCAGCTGGACCTTGACGAATTGATAACCATAGGCCTCTGAATGTTGAATTTTACACATGGGGTTTTACTTCAACTCATCCTGCATTCTGTTTTGAATTTATACAGCAAATTCTGTAGGCTCACAAGTCTCCTGAATTATTATACTATTTAGTTT
AGATTTGAGTATTAAAAAGGCAGACTAAACAGACTTTAGACAGTAGTCTTGCAAAACCCTCAAGATTGAAGAAACCTCTAAGTGATCAAAGGATCACTGATTTCTTCGCATCTAATTCTTTCGAAATGCCGCCTAAGGTAGAGAAGCTTCCAATTAATGTCGTCGAACTCGACAGTAGCGACGACGAGGGCACCGGCGTTCCCGTCGTCGGGATGACAAAACCAGAAATTAATCACGGTGGTAACTCACTGAGTAAATCACCGGTAATAGAAAATCCCAACGCCGTTGTTCCACCGGATTCTAATTACAGGCCACTGGATTCTCGAAGTTTCTGGAGAGCTGGCAATTTTGAAGTTGGTCGTATCAAATCATCTGCTATACACGGTGAATTGGAACATGCTCGTGTTCATCCCAAATTTCTGCATTCCAATGCTACTTCTCATAAATGGGCGTTTGGAGCAATAGCTGAGCTTTTGGACAATGCTGTTGATGAGGTAAGTAGTGGCGCAACATTCGTGAAAATTGACAGAATCTCTAACCCAAGGGACAACTCTCCTGCATTGCTCTTCCAGGACGATGGGGGTGGTATGGATCCAGACCGCCTTCGCAAATGCATGAGCCTGGGTTATTCTTCAAAAACATCAAACTCAACAATTGGACAATATGGTAATGGATTCAAGACGAGCACCATGCGGTTAGGCGCTGATGTAATTGTCTTCAGCCGTTCATCCCGTTCAGGCCGAGCAACTCAAAGTGTTGGCCTTCTGTCCTATACATTTCTTCGGAGAACAGGGCAAGATGATGTGATTGTTCCAATGATCGATTATGATATCACCGGCCATTGGGCTGAACCAATAGTATATGGCTCTCAAGATGATTGGTCAACAAATTTGAATACAATTCTTGAGTGGTCCCCTTTTGCAACAAAATTGGATCTTCTGCAACAGTTTGATGATATAAAATCACATGGAACTAGGATTATTGTCTTCAACCTATGGCTAAACGATGAAGGCATTTATGAACTGAACTTTGATGACGATGATGAGGACATAACGTTGAGAGATGAAGCTAATCATGGAAATACATCAAAAACGAACAAGAGAGGGCGTGAACTGCAATCCCATATTTCGTACCGTTTACGATACTCTCTAAGAGCATACACATCCATATTATACCTCAAAAAATTTACAAATTTTAGTATCATACTAAGAGGGAAGCCTGTTGAGCAGTATAATATTCTTGATGAGTTGAAGCTCACAAAAGTAATCACTTACAGGCCGCAACTTGCTGGAACATCAAAGGAGATCTTGGTTGAAACAAGTCTTGGCTTCGTCAAGGATACTCCATCATCAGTTTGTGGATTCAATGTTTACCACAAAAATCGCCTCATCAGGCCATTCTGGAAAGTTACTGCAGACGGTTCTTCCAAAGGAAATGGTGTTGTTGGTGTTCTGGAAGCAAATTTCATAGAACCTGCACATGACAAGCAAGATTTTGAACGATCTTCTCTGTTTTTCAAGCTGGAGACTAAACTAAAGCAAATAGTGATGGATTACTGGAAAGGTCATTGTCACTTGATAGGATTGAAGCCTCTTGAACCGCATTTACAAAACCTTCTGAGAGAATCTTTTGTTCCACCCCAAGTTCAAGTGGCTAATGCTCAAACACCGTCGCCAACAAAATTTCAAACAGTTACAGATCTTGCAGCTCATCCCAGGCCACATCTCCGTTCTGCACAGAGTGGCAACAGTAGAAGAACCAACTGCAACATGGAATTGCCAGGTGTACAGCCTATGACAGGGAATGCAACTGAGTCTGTTAAAAAAGATACACAAATATCCAGTTCAAGTTGCATGTCAATTGATCAGATTTGTGAAGAAAATATCCAACTCTTTAGGAGGTGTGAATCATTCATCCAGAGAGAAACCGAGTTGAAACGTACAATAGAGGAGCTGGAGAAAGAGTTAGAGGACACTAAAAAGAAAACTTCCGAGCTTTCGACGCGTCTGGAAAGTCAGAAAAAGCTTAAACTTTTGAAACAACTTGGACAGAAAGCATAGTAAAGTTTTTATTCTCTTGTGAATTGTATGCATCCAGCTGGACCTTGACGAATTGATAACCATAGGCCTCTGAATGTTGAATTTTACACATGGGGTTTTACTTCAACTCATCCTGCATTCTGTTTTGAATTTATACAGCAAATTCTGTAGGCTCACAAGTCTCCTGAATTATTATACTATTTAGTTT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc02g084700.2.1 | SL2.50ch02:47798592..47812178 | 645 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc02g084700.2 | SL2.50ch02:47798406..47812303 | 13,898 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc02g084700.2.1.1 | SL2.50ch02:47811920..47812303 | 384 | - | 2 |
| exon | exon:Solyc02g084700.2.1.10 | SL2.50ch02:47803421..47803528 | 108 | - | n/a |
| exon | exon:Solyc02g084700.2.1.11 | SL2.50ch02:47803182..47803331 | 150 | - | n/a |
| exon | exon:Solyc02g084700.2.1.12 | SL2.50ch02:47802816..47802905 | 90 | - | n/a |
| exon | exon:Solyc02g084700.2.1.13 | SL2.50ch02:47802457..47802508 | 52 | - | 2 |
| exon | exon:Solyc02g084700.2.1.14 | SL2.50ch02:47802271..47802382 | 112 | - | 1 |
| exon | exon:Solyc02g084700.2.1.15 | SL2.50ch02:47801150..47801402 | 253 | - | n/a |
| exon | exon:Solyc02g084700.2.1.16 | SL2.50ch02:47800873..47800961 | 89 | - | 1 |
| exon | exon:Solyc02g084700.2.1.17 | SL2.50ch02:47798814..47798856 | 43 | - | n/a |
| exon | exon:Solyc02g084700.2.1.18 | SL2.50ch02:47798406..47798709 | 304 | - | n/a |
| exon | exon:Solyc02g084700.2.1.2 | SL2.50ch02:47811753..47811827 | 75 | - | 2 |
| exon | exon:Solyc02g084700.2.1.3 | SL2.50ch02:47811202..47811236 | 35 | - | n/a |
| exon | exon:Solyc02g084700.2.1.4 | SL2.50ch02:47809080..47809158 | 79 | - | 2 |
| exon | exon:Solyc02g084700.2.1.5 | SL2.50ch02:47808902..47808991 | 90 | - | 2 |
| exon | exon:Solyc02g084700.2.1.6 | SL2.50ch02:47808620..47808695 | 76 | - | 1 |
| exon | exon:Solyc02g084700.2.1.7 | SL2.50ch02:47806389..47806467 | 79 | - | n/a |
| exon | exon:Solyc02g084700.2.1.8 | SL2.50ch02:47806142..47806270 | 129 | - | n/a |
| exon | exon:Solyc02g084700.2.1.9 | SL2.50ch02:47804905..47805003 | 99 | - | n/a |
| intron | intron:Solyc02g084700.2.1.10 | SL2.50ch02:47803529..47804904 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.11 | SL2.50ch02:47803332..47803420 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.12 | SL2.50ch02:47802906..47803181 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.13 | SL2.50ch02:47802509..47802815 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.14 | SL2.50ch02:47802383..47802456 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.15 | SL2.50ch02:47801403..47802270 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.16 | SL2.50ch02:47800962..47801149 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.17 | SL2.50ch02:47798857..47800872 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.18 | SL2.50ch02:47798710..47798813 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.2 | SL2.50ch02:47811828..47811919 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.3 | SL2.50ch02:47811237..47811752 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.4 | SL2.50ch02:47809159..47811201 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.5 | SL2.50ch02:47808992..47809079 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.6 | SL2.50ch02:47808696..47808901 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.7 | SL2.50ch02:47806468..47808619 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.8 | SL2.50ch02:47806271..47806388 | n/a | - | n/a |
| intron | intron:Solyc02g084700.2.1.9 | SL2.50ch02:47805004..47806141 | n/a | - | n/a |
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