Solanum lycopersicum mRNA Solyc03g025720.2.1

mRNA details  
Name
Solyc03g025720.2.1
Type
mRNA
Length
1,977
Organism
Solanum lycopersicum
Description
Long-chain-fatty-acid--CoA ligase (AHRD V1 **** C3JN12_RHOER); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase
Location(s)
SL2.50ch03:3134617..3138463
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008152
Length
3847
Nb exon
4
Sifter term
GO:0004467
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g025720.2.1 Long-chain-fatty-acid--CoA ligase (AHRD V1 **** C3JN12_RHOER); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase

CCATCACCATTTCAATCTCTTTCATTTATTTTCATTTACAATTCAGTATCAATATTCGTTTGCTTTTCGTGGTTATTGATTTTGCTAATGGAGAGTATGACGCTCACTGGATTATTGAAACATGTTGCTGAGAAATTCCCTTCTCGCCGTGCGATTTCCACTTCCGGCAAGTTTGATATTACTCATGCACGCCTTCAACAACTTGTTGAACGTGCTGCTTCTCACCTTGTATCTGCCGGTGTTAAGCATGGCGATGTTATCGCTCTCACTTTCCCAAACACAATCGAGTTCGTGATCATGTTTTTAGCTGTAATTCGAGTTAGAGCCACGGCGGCGCCACTGAATTCAGCGTATATGGCAGAAGAATTTGAGTTTTATTTATCTGATTCAGAATCGAAACTCTTAATAACTGCAAAAGAAGGAAATGAAGCGGCTCAAGCCGCCGCCTCCAAACTGAAAATCCCACATATGACTGTAGCTCTGCCGGAAGCCGAATCTGATATTGTTTACTCCCCGGCTCCTCCTGAATCGAACGTTGAATCGGCGGCCGAAATCGTTAACGACCCATCGGATATTGGACTTTTCCTTCATACATCAGGCACCACGAGCCGGCCAAAAGGCGTTCCTCTTTCTCAGCTTAATTTGGTATCTTCAGTGAACAATATCAAATCTGTGTACAAACTCTGTGACTCCGATTCGACGGTTATTGTGTTGCCGTTGTTTCACGTTCACGGGTTAATGGCCGGGTTACTGAGTTCACTAGGAGCCGGAGCATCCGTGACACTTCCATCTGCCGGGAGATTTTCCGGTACAACTTTTTGGTCAGACATGAAAAAATACAACGCAACATGGTATACAGCTGTGCCTACAATTCACCAAATTCTGTTGGATCGTCACCTCAACAAACCCGAATCTGATTACCCAAAGCTCCGGTTCATTCGGAGCTGTAGTGCAGCACTGGCTCCATCAGTGATGGCCCGGTTAGAAGAAGCATTTGGGGCTCCTGTTTTGGAGGCATATGCAATGACAGAGGCAACTCATTTGATGGCTTCCAACCCATTACCTGAGGATGGACCTCATATTCCCGGGTCGGTAGGGAAACCCGTGGGTCAAGAGATGGCGATATTGAATGAAAATGGTGTTGTACAAGGGCCTAATGCTAAGGGGGAAGTTTGTATTCGGGGTCCAAATGTGACGAAAGGGTACAAGAACAATCCAGAGGCTAATAAATCAGCTTTCCAGTTTGGTTGGTTTCATACCGGAGACGTGGGTTATTTGGACTCTGATGGATACTTGCATTTGGTTGGCAGAATCAAGGAGTTGATCAACCGTGGAGGAGAGAAAATATCACCTATTGAAGTGGATGCAGTCCTAGCTTCTCATCCGGAAATTGCTCAGGCTGTTGCTTTTGGAGTTCCTGATGACAAGTATGGTGAAGAGATAAATTGTGCAATTATTCCAAGAGAAGGGTCAAACATTGATGAAGCAGAGGTTATGAGATTTTGCAAGAAGAACCTGGCAGCCTTTAAGGTCCCAAAGAAGGTATTCATGACTGATTCTCTTCCAAAGACTGCATCAGGGAAAATTCAACGACGACTTGTTGCAGAGCACTTCCTTGCTCAGATTTCAACTGCCAAAGTCCCTAAATTTGGAGCGTAGAAAAAGTGTCGGCTATCTACGGTTCGTTCTCCTATTAACAACAATAAAATGAATGTGTTTTTCGATATTTACTTACGTACATACTACTTGGTCAAGAAATCGGGACACGAGAATATATCAGTGCCTCTAGATTTTCAGTAATGGCGCAAGTGTATTCTCCTCTGATCTTATCAGTATATTGTTTGGCTAGATATCTTGTATTTCTCTTTTTAGTAATGCAAAGGTTCTTTTATTTGTAACGATGCCTTTATCTCTATCATAACAAAACATAATGCAGTCTCCAGACTTTGTATAAGTGATATTTCATATTCACACACA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g025720.2.1SL2.50ch03:3134703..3138145524+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g025720.2SL2.50ch03:3134617..31384633,847+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g025720.2.1.1SL2.50ch03:3134617..3134904288+n/a
exonexon:Solyc03g025720.2.1.2SL2.50ch03:3135144..31361911,048+n/a
exonexon:Solyc03g025720.2.1.3SL2.50ch03:3137243..3137346104+n/a
exonexon:Solyc03g025720.2.1.4SL2.50ch03:3137927..3138463537+2
intronintron:Solyc03g025720.2.1.1SL2.50ch03:3134905..3135143n/a+n/a
intronintron:Solyc03g025720.2.1.2SL2.50ch03:3136192..3137242n/a+n/a
intronintron:Solyc03g025720.2.1.3SL2.50ch03:3137347..3137926n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17753009%2Fdetails feature 17753009
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)