Solanum lycopersicum mRNA Solyc03g043660.2.1

mRNA details  
Name
Solyc03g043660.2.1
Type
mRNA
Length
3,594
Organism
Solanum lycopersicum
Description
Pro-apoptotic serine protease nma111-like protein (AHRD V1 *-** D0NE02_PHYIN); contains Interpro domain(s) IPR009003 Peptidase, trypsin-like serine and cysteine
Location(s)
SL2.50ch03:7147420..7173681
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0005515
  • GO:0003824
Length
26262
Nb exon
24
Sifter term
GO:0004252
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g043660.2.1 Pro-apoptotic serine protease nma111-like protein (AHRD V1 *-** D0NE02_PHYIN); contains Interpro domain(s) IPR009003 Peptidase, trypsin-like serine and cysteine

CGCCAACTCAAACTTGTCAGACGCCGCCGATTTCCTCTCATTTGTCTCTCCTACTCAGCTTTAGAGTGAGAGGAATATCCTTCATCGTCGCCGGAAAATTCACTATCCGTCAATCGTGATCGGAGATTTTGATGTCGGAGATAGTAGTAGAAGAGGAATCTATAATAATGGAGAATTTGTGTATGGATATTGATCCTCCGTTCAAGGAGAACCTCGCTACTGCTGAAGATTGGCGGAAGGCTCTTAGCAAAGTAGTTCCTGCTGTCGTCGTACTCCGAACTACTGCTTGCCGAGCATTCGACACTGAATCTGCTGGTTGCAGCTCCGCAACGGGTTTTGTTGTTGATAAGCGTCGCGGAATTATACTCACGAATCGACATGTTGTTAAACCTGGACCTGTGATGGCGGAGGCTATGTTTGTGAACCGTGAAGAAATACCAGTTTACCCCATATACAGGGACCCTGTTCATGATTTTGGCTTCTTTCGGTATGACCCTGGTGCAATACAATTTTTGAGCTATGAAGAGATTCCTCTTGCTCCTGATGCAGCCTCTGTAGGTGTAGAAATTAGGGTTGTTGGTAATGACAGTGGAGAGAAGGTGTCTATTTTGGCGGGTACCCTTGCTCGATTAGATAGAGATGCTCCGCAGTATAAAAAAGACGGCTACAATGACTTCAACACATTCTACATGCAAGCTGCTTCGGGGACTAAAGGTGGTTCAAGTGGCTCACCTGTAATTGATTGGCAAGGAAGAGCTGTTGCCTTGAATGCTGGGAGCAAGTTATCAAGTGCATCTGCTTTTTTCTTGCCTTTAGAACGAGTTGTCAGGTCACTCAAGTTCTTACAGGAAGGAGGATATCATTCTACTAATACATGGGCAGCGGTCACGATTCCTCGTGGTACACTTCAGGTGACCTTTCTCCATAAAGGCTTTGATGAGACACGCAGGCTTGGAGTTCAACGTGAGACAGAACAGTTGGTGCGCAATTCAACTCCACCCTCTGAAACTGGAATGCTTGTTATCGATTCCGTGGTTCCTGGTGGCCCGGCTCATAATCAATTAGAGCCCGGTGATGTGCTTGTTCGCATGAATGGGGAGATTGTTACCCAGTTCCTGAAGATGGAGACTTTACTCGATGATAGTGTTGAGCAGAAAATTGAGCTTCAAATTGAAAGGGGTGGCACTCCCTTGACAGTGGACTTGTTGGTTCAGGATTTGCACTCAATAACTCCTGACCACTTCTTGGAAGTTGGCGGTGCAGTGATACACGCCCTTTCTTATCAACAGGCTAGAAATTTTCGTTTTAATTGTGGTCTTGTCTATGTCTCTGAACAAGGATACATGCTATCTAGAGCAGGAGTTCCTCGCCACTCCATCATTAAAAAATTTGCAGGGGAAGGTATTTCAAGGCTTGAAGAATTAATTTCCGTTTTATCTAAGTTGTCTAGGGGTGCAAGAGTACCATTGGAGTATATACACTACAAGCAACGACATCAGAGAAAGTCTGTCTTGGTTACAATTGACCGCCATGAGTGGTATGCACCACCACAGATATATAAGCGTAATGACAGATCTGGCTTATGGACAGTAAAACTGGCTTTGCAGCAGGAATCCCCACTCTTGGTATCTGGCATTTATCCAGTCGAAAATCATGCTGAGTCTTGTACTAGCGAGGTCAGTCCTAAGGACTATAGACCTGAACAAGTCAGCCAAGAATCCACAGATGGACTTACTAGTATGGAAATTAGTGGTGAACTTGTTGCTGAGGGACCAAATGCTCAGGATGATTCTGATAATGGAACAAAGAAAGGGCGGGTGGAAGAGAACTCATCAGAAGACGGCAGTGTAGTGGCCGATTGTTCTTTAAATGAGTGTAGAGAAGAAAGATTGAATGAGTCTGAATCTGTGGAAAATGCAGTTCTGAGAGATTATCATGTTGCCGCACCTGTAGAAGCTACATCAGTCGCTGAGCGTGTGATCGAACCTACTCTTGTGATGTTTGAGGTTCATGTCCCTTCATCATGTATGCTTGACGGTGTTCTCTCGCAACAGTTTTTTGGAACTGGGGTAATTGTATATCATTCCCAAACAATGGGCTTGGTTGCTGTTGACAAAAACACAGTTGCAGTACCAGTTTCTGATGTGATGTTATCATTTGCTGCTTTTCCAATTGAAATTCCTGCTCAGGTAGTTTTCCTCCATCCTTTCCATAATTTTGCTCTGGTTGCTTACGATCCCTCTGCTCTGGGAGCTGCTGCAGCCTCCGTGGTTCGTGCTGCTGAACTTCTTCCTGAACCTGCTCTTCGTCGTGGAGATTCAGTGTTTCTAGTGGGATTGAGTAGAAGCCTGCAGGCAACCTCAAGGAAATCAATCGTGACTAATCCTTCTGCTGCTGTGAATATTGGATCCTCTGATGTTCCACGGTACAGAGCAACAAACATGGAGGTCATTGAGCTGGACACTGATTTTGGAAGCACCTTTTCTGGTGTGCTGACTGATGAGTGTGGAAGGGTTCAAGCTTTATGGGGAAGCTTTTCAACACAGCTCAAGTATGGCTCAAGTTCATCAGAAGAGCACCAATTTGTCCGAGGTATCCCAATATATAAAATAAGCCAACTCGTTGACAGGATTACTTCTGGCACTGAGGGACTGCCTCGTCTTATAAATGGTTTGCGAAGACCTATGCCTTGCATAAGGATATTAGAAGTTGAACTTTACCCTACTTTGCTATCTAAAGCTCGAAGTTTTGGATTAAGTGATGCATGGATCCAGGCCCTCGTGAAGAAGGATCCTCTGAGACGCCAAGTTTTGCGAGTCAAAGGTTGCTTTGCTGGGTCAAAAACTGAAAACTTGTTGGAACAAGGGGACATGGTCTTAGCAATTAATAAGCAGCCAGTTACATGCTTTCGTGACATTGAAGATGCATGCCAATCTTTAGACCATTGCACTCAGGATGATGGAAAACTAGACTTGACAATTTTCCGTCAGGGAAAAGAAATTGAACTACTTGTGGGAACGGATGTGAGGGATGGAAATGGAGCCAAACGAGCAATAAATTGGTGTGGCGGTATCCTCCAAGAACCTTATCCAGCCGTACGTGCACTTGGGTTTCTGCCTGAAGAAGGCCATGGAGTGTATGTGGCAAGGTGGTGTCATGGGAGTCCTGCACATCGTCATGGTCTCTTTGCTCTTCAATGGATAGTTGAAGTCAACGGGAAACCAACCCCTAACTTGGATGCTTTTGTCGATGTGACTAAGACAATAGAGCATGGAGAGTTTGTTCGTGTACGAACAATCCACCTGAATGGGAAACCTCGAGTGCTCACATTGAAGCAAGATTTACATTACTGGCCAACATGGGAACTCAGGTTTGATCCTGAAACTGCAATGTGGCGACGCAAAGTAATTAAATCATTGGATTCTGATGTTCTGTGAACTGTTTCACCAGATTGTTCGAAGCATTTATCCTACTCATTAGTTGGTATTTGAACTTCTCATGTGTAGCTAGCTGTACGAGAATCTTAATAAACTGAAGGTATATTGATTTGATGCCTATATGATGTGAAATAATTAGATATTTGATCTTTTTTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g043660.2.1SL2.50ch03:7147576..71735501,102-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g043660.2SL2.50ch03:7147420..717368126,262-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g043660.2.1.1SL2.50ch03:7173289..7173681393-2
exonexon:Solyc03g043660.2.1.10SL2.50ch03:7161591..716165666-n/a
exonexon:Solyc03g043660.2.1.11SL2.50ch03:7161037..7161144108-n/a
exonexon:Solyc03g043660.2.1.12SL2.50ch03:7156827..715690781-n/a
exonexon:Solyc03g043660.2.1.13SL2.50ch03:7155201..715525050-1
exonexon:Solyc03g043660.2.1.14SL2.50ch03:7154887..7155052166-n/a
exonexon:Solyc03g043660.2.1.15SL2.50ch03:7152852..7153352501-n/a
exonexon:Solyc03g043660.2.1.16SL2.50ch03:7151703..7151885183-n/a
exonexon:Solyc03g043660.2.1.17SL2.50ch03:7151519..7151624106-2
exonexon:Solyc03g043660.2.1.18SL2.50ch03:7150499..7150669171-2
exonexon:Solyc03g043660.2.1.19SL2.50ch03:7150303..715038280-n/a
exonexon:Solyc03g043660.2.1.2SL2.50ch03:7172875..717294571-n/a
exonexon:Solyc03g043660.2.1.20SL2.50ch03:7150000..7150227228-n/a
exonexon:Solyc03g043660.2.1.21SL2.50ch03:7148641..7148856216-n/a
exonexon:Solyc03g043660.2.1.22SL2.50ch03:7148329..7148486158-1
exonexon:Solyc03g043660.2.1.23SL2.50ch03:7147921..7148032112-n/a
exonexon:Solyc03g043660.2.1.24SL2.50ch03:7147420..7147753334-n/a
exonexon:Solyc03g043660.2.1.3SL2.50ch03:7171701..7171835135-n/a
exonexon:Solyc03g043660.2.1.4SL2.50ch03:7167847..716790559-1
exonexon:Solyc03g043660.2.1.5SL2.50ch03:7166426..716646237-n/a
exonexon:Solyc03g043660.2.1.6SL2.50ch03:7165587..7165712126-n/a
exonexon:Solyc03g043660.2.1.7SL2.50ch03:7164053..716414290-n/a
exonexon:Solyc03g043660.2.1.8SL2.50ch03:7161880..716194566-n/a
exonexon:Solyc03g043660.2.1.9SL2.50ch03:7161742..716179857-n/a
intronintron:Solyc03g043660.2.1.10SL2.50ch03:7161657..7161741n/a-n/a
intronintron:Solyc03g043660.2.1.11SL2.50ch03:7161145..7161590n/a-n/a
intronintron:Solyc03g043660.2.1.12SL2.50ch03:7156908..7161036n/a-n/a
intronintron:Solyc03g043660.2.1.13SL2.50ch03:7155251..7156826n/a-n/a
intronintron:Solyc03g043660.2.1.14SL2.50ch03:7155053..7155200n/a-n/a
intronintron:Solyc03g043660.2.1.15SL2.50ch03:7153353..7154886n/a-n/a
intronintron:Solyc03g043660.2.1.16SL2.50ch03:7151886..7152851n/a-n/a
intronintron:Solyc03g043660.2.1.17SL2.50ch03:7151625..7151702n/a-n/a
intronintron:Solyc03g043660.2.1.18SL2.50ch03:7150670..7151518n/a-n/a
intronintron:Solyc03g043660.2.1.19SL2.50ch03:7150383..7150498n/a-n/a
intronintron:Solyc03g043660.2.1.2SL2.50ch03:7172946..7173288n/a-n/a
intronintron:Solyc03g043660.2.1.20SL2.50ch03:7150228..7150302n/a-n/a
intronintron:Solyc03g043660.2.1.21SL2.50ch03:7148857..7149999n/a-n/a
intronintron:Solyc03g043660.2.1.22SL2.50ch03:7148487..7148640n/a-n/a
intronintron:Solyc03g043660.2.1.23SL2.50ch03:7148033..7148328n/a-n/a
intronintron:Solyc03g043660.2.1.24SL2.50ch03:7147754..7147920n/a-n/a
intronintron:Solyc03g043660.2.1.3SL2.50ch03:7171836..7172874n/a-n/a
intronintron:Solyc03g043660.2.1.4SL2.50ch03:7167906..7171700n/a-n/a
intronintron:Solyc03g043660.2.1.5SL2.50ch03:7166463..7167846n/a-n/a
intronintron:Solyc03g043660.2.1.6SL2.50ch03:7165713..7166425n/a-n/a
intronintron:Solyc03g043660.2.1.7SL2.50ch03:7164143..7165586n/a-n/a
intronintron:Solyc03g043660.2.1.8SL2.50ch03:7161946..7164052n/a-n/a
intronintron:Solyc03g043660.2.1.9SL2.50ch03:7161799..7161879n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17755726%2Fdetails feature 17755726
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