Solanum lycopersicum gene Solyc03g116500.2

Gene  
Name
Solyc03g116500.2
Type
Gene
Organism
Solanum lycopersicum
Synonyms / aliases
Solyc03g116500
Length
4,309
  
Description
Polygalacturonase (AHRD V1 ***- Q9M7D3_SOLLC); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28
Location(s)
SL2.50ch03:65900461..65904769
GFF source
ITAG_eugene
From BOGAS
1
Length
4309
Genome Viewer  
Related features  
Features that are parts of this gene 
TypeNameLocationLengthStrandPhase
mRNASolyc03g116500.2.1SL2.50ch03:65900461..659047691,756+n/a
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Genomic sequence unprocessed genomic sequence region underlying this gene 
mRNA Solyc03g116500.2.1  
Ontology terms terms associated with this mRNA 
cDNA sequence spliced cDNA sequence, including UTRs 
Protein sequence translated polypeptide sequence 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g116500.2.1SL2.50ch03:65900535..65904447453+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g116500.2SL2.50ch03:65900461..659047694,309+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g116500.2.1.1SL2.50ch03:65900461..65900775315+n/a
exonexon:Solyc03g116500.2.1.2SL2.50ch03:65901671..65901802132+n/a
exonexon:Solyc03g116500.2.1.3SL2.50ch03:65901888..65902058171+n/a
exonexon:Solyc03g116500.2.1.4SL2.50ch03:65902142..6590216221+n/a
exonexon:Solyc03g116500.2.1.5SL2.50ch03:65902292..65902499208+n/a
exonexon:Solyc03g116500.2.1.6SL2.50ch03:65903014..6590309582+n/a
exonexon:Solyc03g116500.2.1.7SL2.50ch03:65903167..65903275109+2
exonexon:Solyc03g116500.2.1.8SL2.50ch03:65903434..65903550117+1
exonexon:Solyc03g116500.2.1.9SL2.50ch03:65904169..65904769601+n/a
intronintron:Solyc03g116500.2.1.1SL2.50ch03:65900776..65901670n/a+n/a
intronintron:Solyc03g116500.2.1.2SL2.50ch03:65901803..65901887n/a+n/a
intronintron:Solyc03g116500.2.1.3SL2.50ch03:65902059..65902141n/a+n/a
intronintron:Solyc03g116500.2.1.4SL2.50ch03:65902163..65902291n/a+n/a
intronintron:Solyc03g116500.2.1.5SL2.50ch03:65902500..65903013n/a+n/a
intronintron:Solyc03g116500.2.1.6SL2.50ch03:65903096..65903166n/a+n/a
intronintron:Solyc03g116500.2.1.7SL2.50ch03:65903276..65903433n/a+n/a
intronintron:Solyc03g116500.2.1.8SL2.50ch03:65903551..65904168n/a+n/a
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Related views  
Genetic loci
 http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17774656%2Fdetails feature 17774656
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