Solanum lycopersicum mRNA Solyc03g120200.1.1

mRNA details  
Name
Solyc03g120200.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc03g120200.1.1
Length
3,123
  
Description
Regulator of telomere elongation helicase 1 homolog (AHRD V1 ***- RTEL1_AEDAE); contains Interpro domain(s) IPR013020 DNA helicase (DNA repair), Rad3 type
Location(s)
SL2.50ch03:68651931..68665587
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0016818
  • GO:0005524
  • GO:0006139
Length
13657
Nb exon
23
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g120200.1.1 Regulator of telomere elongation helicase 1 homolog (AHRD V1 ***- RTEL1_AEDAE); contains Interpro domain(s) IPR013020 DNA helicase (DNA repair), Rad3 type

ATGCCGATTTACAAAATTAGGGGAATCGATGTCGATTTCCCTTACGAGGCTTACGATTGCCAAATCGCTTACATGGAAAAAGTTATTCAGTCCCTTCAAAATAGATCCAATGCATTGCTTGAGAGTCCAACTGGGACTGGGAAGACCTTGTGTCTTCTTTGTGCCACATTGGCTTGGAGGAAGAGTTTGGGGGGTTTCTCAGTCCGGAAGAGTGGAAGGAGAGATCATATTTCCAGTAGCCAGCAGTCTGATGAGTCTTCTCAATCTGAATCTTCAACGTTACCGAGTATTGTATATGCATCACGCACACATAGCCAAATTCGACAAGTGGTGAAAGAGTTAAAGAGGACCAACTACAGGCCCAAAATGGTAGTCTTAGGGTCTCGGGAACAACTATGCATTCATGAAGAAGTAAGTCAGCTGCGTGGAAAAACACAGACAAATGCCTGCCATGCACTTTGCAAAAAACGCAAAAAACGTTATTGTGCCCATTTTTCTCGAGTTGCAGAGTTCATGAAGATTAACCCTAGTATCGGAGAGGAGCCTATTGACATAGAGGATTTGGTCAACATCGGAAGAAGCAGTGGACCGTGTCCATATTATGTATCACGAGAACTTCACAAGACTGTGGACATATTATTTGCGCCTTACAATTATCTTATTGATCGCGGATACAGAAAATCTTTGAATATTCAGTGGACAAACAGTATACTTATATTTGATGAAGCTCATAACTTGGAAAGCTTGTGTGCTGATGCAGCCTCATTTGACCTTTCTTCTGGCCTTCTGACAGCTTGCATCTCTGAAGCTAAAAATTGTATAGACCTTTCGATAGAAAGGAGGGAGATGTCAAGTGACAAATCATGTAATCCCGATAACTTTGCCATTCTCAGAGCACTTCTGTTGAAGCTTGAGAAAAAAATTGGTGAAGTACCTATTGATTCAAAGGAGTTGGGTTTCACGAAGCCTGGACCATACATTTATGAGTTTCTTGCTGATCTAAATATCACACAGAAAACGGCCAACATGCTCATTGATATAATTGAGGAAGCTAGTGTACTTCTTGAAGAAGATACAAACACTGCTGAAGATAAAAAAACAAACAAGTCAAAAAGCACAGTCTGCAGATTGGAAAGCATGGGTGACATTCTACAGCAGATTTTCAGAGATGATGGGAACGCTCATGCTCAATACTATCGTGTTCATGTTCAGGAAGTTCAAGGAAATGGCATGGATTCTTTTAAAGGCAAGGGATCTAGGACACTGAGCTGGTGGTGTTTCAATCCAGGTATTGCAATGGAGCAGTTCTCCAGATTAGGTGTTGGATCTATCATTTTGACTTCTGGCACATTATCTCCAATGGATTCCTTTGCTGAGGAATTGAAGTTAGATTTTCCAGTCCGTTTAGAGAACCCTCATGTTATATCAGACAATCAGATATGGGCTGGTGCTGTACCCGTGGGCCCTTCTGGTTATACATTCAACTCATCATATAGGACGCGTGATTCTATTGAATACAAGCAAGAGCTTGGGAATGCCATTGTCAATTTTGCTCGCGTTGTACCAGATGGCCTTCTTGTATTCTTTCCTTCATATTACATTTTGGAGCAATGCATTGGCTGCTGGAAAACTTTGGGACAATCAATCTCAATGGGTTCAAGTACAATATGGGAAAGGATATGCAAACACAAGCTGCCTGTGGTTGAACCGAGACAATCTTCCCTTTTCCCAACGGCAATTGAAGACTATATGGCCAAGTTAAAGGACAAATCAGCATCTGGGGCTGTATTTTTTGCCGTCTGTCGCGGAAAAGTGAGTGAGGGGCTGGATTTTACTGACCATGCTGGTAGAGCTGTTGTGATCACTGGCATCCCCTTTGCCACAAGGACTGATCCTAAGGTTCGGTTGAAACGCGAATTCCTGGATCAACAGATGGCCTTGCAACCAACTGGATCTAAGGTCTTAACAGGAGAAGATTGGTATACTCAACAAGCAACCAGGGCAGTTAATCAGGCTGTGGGCCGTGTCATTCGTCATAAAGATGATTTTGGAGCAATTATATTTTGTGATGAAAGATTCACATACTCCAATCGTCAGTCACAGATATCATGTTGGATACAACCCCATATCAAGTGTCATTCCAAATTTGGGGAAGTAGTCTTCTCATTGACACGCTTTTTTCGTGATGGAAGAATCCATGGCCCTACAAAGCCAGAAATGATGCTACTAGATGACAAGGAAACAGTAAAGAGCCTAGGGAGCTCTCAGTCTCAACTTCACTTTGAAAAGCTTCTCACCTCTCTGGTCTCATCAGTGGATATTCCTTGCTCAACTAATCAATCGTCTTCCTCAGTTAAGCAAGGCAACGGCCCTGGTGGGCTGGAAGACATACTTCCTGCTAATAAATCATCTCTAAGATCTGATAAGATAGCTAAGCTTCTGGCCGTAAAACATGCAAGTAATTTATTGGTCCCTGGGCGAAAAGACATGCCAATTAGCAATCAGAAAATAATTGACTTGACCAAACATGAATTGGCTGATGAACCACCAAAAGATGTTGTTGCACCTTGTTCTATGAAGAGGCCTCGGTTAGCATTGACAGGATCTGATTGTCAAAGCGATCATTTTCGAAAGCCTCATGATAGTCCTGACTGTTCCTCAGTTGCCCATCACCTGCTGTCTGAAAGTGACTTTAGATATTTATTGAATAATAAGAAGTCACAGTATTCTGATAACCAAAGTACACGAAACAGTAATTTAGATAGAGCAAACCTTCTTGCAGATGAGAGGACATCACGAAAAATCGCAGGATTAGTTGACCTGCAAAATGAAGACGGAATTCTTAGCTCTGCACCTTGCAATAATGAGGAGAAAGGATCAGCTTTTCTTGTTCAGGTCAGGGAAAAGCTTACTGATACAGAATACCATGAATTCGTTGGGTATATGAAGTCACTCAAGTCTAAAGCAATGAAGATAGGCCAAGTTCTTCAATCTATCACAAGATTATTTTCTCTTCCTGATAGACTACCTCTCCTTCACAGATTTAAGGATTATGTTCCCGCGAAGTACCATTCCTTGTATGATCAGTATTTAAAAAGAAATCAGGAAGTAGCTCACTTGTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g120200.1.1SL2.50ch03:68651930..686655871,041-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g120200.1SL2.50ch03:68651931..6866558713,657-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g120200.1.1.1SL2.50ch03:68665486..68665587102-n/a
exonexon:Solyc03g120200.1.1.10SL2.50ch03:68658979..68659120142-2
exonexon:Solyc03g120200.1.1.11SL2.50ch03:68658732..68658886155-1
exonexon:Solyc03g120200.1.1.12SL2.50ch03:68658531..6865862292-2
exonexon:Solyc03g120200.1.1.13SL2.50ch03:68658340..68658447108-n/a
exonexon:Solyc03g120200.1.1.14SL2.50ch03:68658192..6865826069-n/a
exonexon:Solyc03g120200.1.1.15SL2.50ch03:68657177..6865726387-n/a
exonexon:Solyc03g120200.1.1.16SL2.50ch03:68656680..6865673960-n/a
exonexon:Solyc03g120200.1.1.17SL2.50ch03:68656458..68656573116-n/a
exonexon:Solyc03g120200.1.1.18SL2.50ch03:68655927..6865598458-1
exonexon:Solyc03g120200.1.1.19SL2.50ch03:68655737..68655842106-n/a
exonexon:Solyc03g120200.1.1.2SL2.50ch03:68664546..68664802257-n/a
exonexon:Solyc03g120200.1.1.20SL2.50ch03:68654238..6865430265-2
exonexon:Solyc03g120200.1.1.21SL2.50ch03:68653555..68654145591-n/a
exonexon:Solyc03g120200.1.1.22SL2.50ch03:68652088..68652233146-n/a
exonexon:Solyc03g120200.1.1.23SL2.50ch03:68651931..6865201282-1
exonexon:Solyc03g120200.1.1.3SL2.50ch03:68664200..68664348149-1
exonexon:Solyc03g120200.1.1.4SL2.50ch03:68661028..6866110982-2
exonexon:Solyc03g120200.1.1.5SL2.50ch03:68660807..68660954148-1
exonexon:Solyc03g120200.1.1.6SL2.50ch03:68660524..68660680157-n/a
exonexon:Solyc03g120200.1.1.7SL2.50ch03:68660061..68660237177-2
exonexon:Solyc03g120200.1.1.8SL2.50ch03:68659434..68659561128-2
exonexon:Solyc03g120200.1.1.9SL2.50ch03:68659254..6865929946-n/a
intronintron:Solyc03g120200.1.1.10SL2.50ch03:68659121..68659253n/a-n/a
intronintron:Solyc03g120200.1.1.11SL2.50ch03:68658887..68658978n/a-n/a
intronintron:Solyc03g120200.1.1.12SL2.50ch03:68658623..68658731n/a-n/a
intronintron:Solyc03g120200.1.1.13SL2.50ch03:68658448..68658530n/a-n/a
intronintron:Solyc03g120200.1.1.14SL2.50ch03:68658261..68658339n/a-n/a
intronintron:Solyc03g120200.1.1.15SL2.50ch03:68657264..68658191n/a-n/a
intronintron:Solyc03g120200.1.1.16SL2.50ch03:68656740..68657176n/a-n/a
intronintron:Solyc03g120200.1.1.17SL2.50ch03:68656574..68656679n/a-n/a
intronintron:Solyc03g120200.1.1.18SL2.50ch03:68655985..68656457n/a-n/a
intronintron:Solyc03g120200.1.1.19SL2.50ch03:68655843..68655926n/a-n/a
intronintron:Solyc03g120200.1.1.2SL2.50ch03:68664803..68665485n/a-n/a
intronintron:Solyc03g120200.1.1.20SL2.50ch03:68654303..68655736n/a-n/a
intronintron:Solyc03g120200.1.1.21SL2.50ch03:68654146..68654237n/a-n/a
intronintron:Solyc03g120200.1.1.22SL2.50ch03:68652234..68653554n/a-n/a
intronintron:Solyc03g120200.1.1.23SL2.50ch03:68652013..68652087n/a-n/a
intronintron:Solyc03g120200.1.1.3SL2.50ch03:68664349..68664545n/a-n/a
intronintron:Solyc03g120200.1.1.4SL2.50ch03:68661110..68664199n/a-n/a
intronintron:Solyc03g120200.1.1.5SL2.50ch03:68660955..68661027n/a-n/a
intronintron:Solyc03g120200.1.1.6SL2.50ch03:68660681..68660806n/a-n/a
intronintron:Solyc03g120200.1.1.7SL2.50ch03:68660238..68660523n/a-n/a
intronintron:Solyc03g120200.1.1.8SL2.50ch03:68659562..68660060n/a-n/a
intronintron:Solyc03g120200.1.1.9SL2.50ch03:68659300..68659433n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17779389%2Fdetails feature 17779389
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