Solanum lycopersicum mRNA Solyc04g050150.2.1

mRNA details  
Name
Solyc04g050150.2.1
Type
mRNA
Length
3,916
Organism
Solanum lycopersicum
Description
Chromodomain-helicase-DNA-binding protein 7 (AHRD V1 *--- CHD7_CHICK); contains Interpro domain(s) IPR000330 SNF2-related
Location(s)
SL2.50ch04:45656390..45692928
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005524
Length
36539
Nb exon
20
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g050150.2.1 Chromodomain-helicase-DNA-binding protein 7 (AHRD V1 *--- CHD7_CHICK); contains Interpro domain(s) IPR000330 SNF2-related

ATGCTTGGTGCTAATGTGCTTTTGCCCTTTGCTATTCATAATTGTCAAGTTGAGGAGATTGATGATATTGAAGACAGTTCTGGTGATCCATTTGTTGCGGATGCCATTGCAAATGAAAGAGAGTTAAATCTTTCTGAAGAGCAGAAGAGGAAGTTTAAGAAGGTTAAAGAGGAAGATGATCTAAAAACTGATCTGAAGCTTAGGAGATGTTTGAAACAGAGAAGACACAAGAACAGACAGAAATTGGAGGAGATACAGGAAGATACAACAGATGTCACTACTGGTTATTTATCTCAAGATTTTGGCTTTGACAAGAAAGAGTATTCCACCGTTGATGATGGGGATGCGCCAAAAAGCAATGAAGTTACATCGGTTATTGATGCCACAGTTTCAGAACATGAAATTGATGCTGAGGCCAAAGGATTGAAACTTTTACACAACTTCGAAGAGATGGAGCCTCAAAGTAAAAAGGCTCGGATCATTATACCAGATAGTGATGAGGAGGATCTTCCTGGGAAAATGTTGTCTCCTACATGTAGTTTGAGCGAGACAGAAGATCAATCAAATCCACAAAGAGATGGAGATAATGTGCTTCCAGTTAGTTCCCTTCCTGTATGCAATGAGAAGCAAAATTTTCGCTGCACTGCTTGTGATAAAGTGGCTATTGAAGTCCATGCACATCCTCTTTTGAGAGTTGTCCTTTGCCTGGACTGCAAAACTTCAATGAAAACAAAGATGCAGGATGTTGATTGCTCAGAGTGCTACTGCAGATGGTGTGGGCGTTGCAGCGATCTGTTAAGCTGTAAATCATGCAAAAGGTTATTTTGTAGTGTGTGTATAAGGAGGAACCTTGGTGAAGAAATTTTAACAGGAATTAAAACATCTGGGTGGCAATGCTGCTGTTGCTCCCCAAGTATCCTGCTTCCGTTGGTTTCAGTGTTGGAGAAGATCATGGAGTCTCAAGGTTTGGTAGATTCAAATACAGACACGGATTCAGATAACTCAGATGCTGATATCAACGAGCATAAAAGCACCAAGAGAAGGCCTAAAAAGAAAATTAGAAGAATCCTGGATGATACTGAGTTAGGGGAGGAGACAAAAAGGAAGATTGCAATTGAAAAGGAACGCCAAGAACGCCTCAAATCTCTGGGAGCAAAATTTTCAAGCAAGACTATGTTCATGGATTCTGGGGGTTGTAGCAAAAGCTCGTATGAAACTGGTAGCTTGGAAATGCTTGGTGATATTCAAACTGGTTACATAGTTAATGTGGTGAGGGAGGAAGGGGAAGAGGCTGTCAGGATTCCACGCAGTATCTCCGCAAAACTAAAATCTCACCAGGTTGCTGGGATTCGATTTATGTGGGAAAATATTATTCAATCTATCAGGAAAGTCAAGGCTGGGGATAAAGGTCTTGGTTGCATCCTAGCTCATACTATGGGTCTAGGTAAAACGTTTCAGGTGATTTCTTTCTTGTATGCTGCTATGAGGTGTGTGGATTTAGGATTGAGAACTGCTCTCATAGTCACGCCTGTAAGTGTTCTGCATAACTGGCGGCAGGAATTTATAAAATGGGAACCATCAGAAATGAAGCCTCTCCGTGTCTTTATGCTTGAAGAAGTTCCAAGGGAGAGAAGGGCCGAGCTACTCCAAAAATGGAGAGTAAAAGGTGGCGTTTTCTTAATTGGCTACACTGCTTTCAGAAATTTGACACTAGGGAAGAATATAAAAGAGCGCCACGTGGCCAGAGAAATTTGTCAGGCTCTTCAGGACGGACCTGACATTCTTGTTTGTGATGAGGCTCATATTATCAAGAATACCAGAGCTGATGTTACTCAAGCCTTGAAACAAGTCAAGTGCCAGAGAAGGATTGCATTAACTGGATCTCCTCTTCAAAACAATTTGATGGAGTACTATTGTATGGTTGATTTTGTGAGGGAAGGATTTCTTGGCAGCAGTCATGAATTTAGAAACCGCTTTCAGAATCCGATAGAAAATGGTCAACACACCAATTCTACAGCTGATGATGTTAAGATTATGAATCAGCGATCTCATATTCTCTATGAACAGTTAAAAGGATTTGTTCAAAGAATGGACATGAATGTCGTGAAAATGGATTTGCCACCAAAAACTGTCTATGTGATGTCTGTAAAGCTTTCTCCTTTACAGAGAAAATTGTATAAAAGATTTCTAGATGTTCATGGCTTCACCAAGGACAAGGTTTCTGGTGAGAAGATAATGAAGAGATCATTTTTTGCCGGGTACCAAGCCTTGGCTCAGATATGGAACCATCCTGGGATTTTGCAATTGACGCGAGAAAACAGAATCTCTAGTCGTCCTGAAGATCCTGTTGAGATCCTTCTTGCAGATGATTGCTCAAGTGATGAGAACACATATTATAATGTGGTTTCTGGAGAGAAGACGAATAGCAACAATGAAGCTCTCAAAAAAAATCATAATGGCTTCCTCCATGGGGATTGGTGGAGTGATCTTCTAGATAATAATTGCAAAGAAGTTGATTATAGTGGCAAAATGGTTTTGCTACTCGACATCCTGACAATGAGCTCTAATGTTGGTGACAAAGCACTCGTGTTTAGTCAGAGCTTGTCAACCCTAGATCTCATTGAACAATACCTTTCAAAACTAACGCGCCCAGGGAAAAAGGGGAAGTACTGGAAACGGCGGAAAGACTGGTACAGGATTGATGGAAGAACAGAATCATCTGAAAGGCAGAAACTTGTTGACTGTTTTAACAGTCCATTGAATAGAAGGGTTAAGTGCGTACTGATATCTACTAGAGCTGGATCTCTTGGTATCAATCTTTATGCTGCCAACCGTGTAATTATAGTTGATGGCTCTTGGAATCCTACTCATGATCTTCAAGCTATATACCGAGCTTGGAGGTATGGTCAAACAAAACCTGTTTTTGCTTACCGTTTACTGGCACATGGAACGATGGAGGAAAAGATATACAAGCGCCAGGTAACAAAGGAAGGTCTTGCAGCACGGGTGGTTGATAGGCAACAAGTACATAGAACTATATCTAAAGAGGAAATGTTGCACCTTTTTGAATTTGGAGATGACGAAAGCTGTGATATACCTCTGGAATTGAAGCAAGTTAGAGAACATGCTGGTGAAGCAAACTCAAATGTAAATGTTGGAAGTGTTCAGAAACAAAAATTAACCTTTCCAAATGGAAGTTCTTCTTCTGACAAGCTAATGCAAAGTTTGATTGACAGGCATCATCCGCGGTGGATTGCGAATTATCATGAACATGAAAGTCTCCTGCAAGAGAATGAAGATGAAAAGCTATCAAAAGAAGAGCAGGAAATGGCGTGGGAAGTGTATCGGAGATCTATTGAATGGGAAGAGAGGAGAGTTTTGCCTGATGAACCTGTTGAACAGCAGCATATCTCTACCACTGAATCATTGTTAAAGCAAAAGCCATTTGTTCCCAGGGCCACCGTTTTTCCGCCAGCGGACCGTAATCTTGTATTTGCAGTGGGGAGTTCTAGATGCCGTTTGGTGCATAGGAAGTGCACAAAGCTATCACATTTGCTTACTCTTAGAAGTCAAGGCACAAAGTGGGGTTGCAGCACCGTTTGCGGGGAGTGTGCTCAAGAGATCAAGTGGGAGGGTGTTAGATCAGCAAAGTAATGCCATCCATGTATTTATATTATAGTTCAGCCTTTTTTGGGGCGATTCAATACACTGTGAGGGACTTGGTAAACATTCAGTTTTAGGTTTCAGCCATGACTTGAGAAAACAATCTACTCATTTTGGGGTAAGGGAGATGGAAATGTTCTACTGAGATTTGGCTCTTTGTTAAGTGAAACTGTTGTCATCATTTGTATTTTGAAAAATGCAGAGGGATATCTCTTTTGTCTGAACTGCTACATCATATTGCAAAGAAGGAAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g050150.2.1SL2.50ch04:45656651..456929281,218-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g050150.2SL2.50ch04:45656390..4569292836,539-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g050150.2.1.1SL2.50ch04:45692881..4569292848-n/a
exonexon:Solyc04g050150.2.1.10SL2.50ch04:45672363..45672504142-n/a
exonexon:Solyc04g050150.2.1.11SL2.50ch04:45671192..45671341150-n/a
exonexon:Solyc04g050150.2.1.12SL2.50ch04:45671058..4567111356-1
exonexon:Solyc04g050150.2.1.13SL2.50ch04:45670680..45670983304-n/a
exonexon:Solyc04g050150.2.1.14SL2.50ch04:45662592..45662727136-2
exonexon:Solyc04g050150.2.1.15SL2.50ch04:45662031..4566208959-n/a
exonexon:Solyc04g050150.2.1.16SL2.50ch04:45661605..45661828224-1
exonexon:Solyc04g050150.2.1.17SL2.50ch04:45659398..45659601204-1
exonexon:Solyc04g050150.2.1.18SL2.50ch04:45659235..4565931379-n/a
exonexon:Solyc04g050150.2.1.19SL2.50ch04:45658887..45659155269-1
exonexon:Solyc04g050150.2.1.2SL2.50ch04:45692523..45692636114-n/a
exonexon:Solyc04g050150.2.1.20SL2.50ch04:45656390..45657057668-n/a
exonexon:Solyc04g050150.2.1.3SL2.50ch04:45692179..4569226284-n/a
exonexon:Solyc04g050150.2.1.4SL2.50ch04:45690810..45691304495-n/a
exonexon:Solyc04g050150.2.1.5SL2.50ch04:45690182..45690471290-1
exonexon:Solyc04g050150.2.1.6SL2.50ch04:45689436..4568952691-n/a
exonexon:Solyc04g050150.2.1.7SL2.50ch04:45689142..45689357216-n/a
exonexon:Solyc04g050150.2.1.8SL2.50ch04:45687399..45687518120-n/a
exonexon:Solyc04g050150.2.1.9SL2.50ch04:45677918..45678084167-1
intronintron:Solyc04g050150.2.1.10SL2.50ch04:45672505..45677917n/a-n/a
intronintron:Solyc04g050150.2.1.11SL2.50ch04:45671342..45672362n/a-n/a
intronintron:Solyc04g050150.2.1.12SL2.50ch04:45671114..45671191n/a-n/a
intronintron:Solyc04g050150.2.1.13SL2.50ch04:45670984..45671057n/a-n/a
intronintron:Solyc04g050150.2.1.14SL2.50ch04:45662728..45670679n/a-n/a
intronintron:Solyc04g050150.2.1.15SL2.50ch04:45662090..45662591n/a-n/a
intronintron:Solyc04g050150.2.1.16SL2.50ch04:45661829..45662030n/a-n/a
intronintron:Solyc04g050150.2.1.17SL2.50ch04:45659602..45661604n/a-n/a
intronintron:Solyc04g050150.2.1.18SL2.50ch04:45659314..45659397n/a-n/a
intronintron:Solyc04g050150.2.1.19SL2.50ch04:45659156..45659234n/a-n/a
intronintron:Solyc04g050150.2.1.2SL2.50ch04:45692637..45692880n/a-n/a
intronintron:Solyc04g050150.2.1.20SL2.50ch04:45657058..45658886n/a-n/a
intronintron:Solyc04g050150.2.1.3SL2.50ch04:45692263..45692522n/a-n/a
intronintron:Solyc04g050150.2.1.4SL2.50ch04:45691305..45692178n/a-n/a
intronintron:Solyc04g050150.2.1.5SL2.50ch04:45690472..45690809n/a-n/a
intronintron:Solyc04g050150.2.1.6SL2.50ch04:45689527..45690181n/a-n/a
intronintron:Solyc04g050150.2.1.7SL2.50ch04:45689358..45689435n/a-n/a
intronintron:Solyc04g050150.2.1.8SL2.50ch04:45687519..45689141n/a-n/a
intronintron:Solyc04g050150.2.1.9SL2.50ch04:45678085..45687398n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17795603%2Fdetails feature 17795603
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