Solanum lycopersicum mRNA Solyc06g008790.2.1

mRNA details  
Name
Solyc06g008790.2.1
Type
mRNA
Length
3,867
Organism
Solanum lycopersicum
Description
Cc-nbs-lrr, resistance protein
Location(s)
SL2.50ch06:2722296..2726237
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006952
  • GO:0006915
Length
3942
Nb exon
2
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g008790.2.1 Cc-nbs-lrr, resistance protein

ATGGAAAAACGAAAAGATAATGAAGAAACAAACAACTCATTGGTGTTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTACCTAGAGAATGAGGAAAATCAAAAAGCTCTTGACAAAGATCAAGTTGAAAAGCTAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACTAGAAAAAGACAAGAGGTTGAGAAACTGCTTCAACCACTTTTGGATGATGATGTCTTTACTAGCCTCACCAGTAATATGGATGATTGTATCAGCTTGTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTTTTGAATCTGTATCATCTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAAGTTCTTCAGAATGTATGTGGCAACCTAAGAGATTTCCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGACGGTTGAGAATGTCTTACCTCTGTTTCAACTGATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATCAGACTGATGAAGACTCTCGACTCTCCGAGCTAGATGCGGATGAACCAAATGATAGAGTCTCTCGACTTTTCAAGCTAGCACATCTACTCTTGAAGATTGTCCCGGTTGAACTGGAGGTTATGCACATATGTTATACAAACTTGAAAGCTTCAACTTCAGCTGAAGTTGGACTCTTCATTAAGCAGCTTCTAGAAACCTCTCCAGATATTCTGAGAGAATATCTAATTCATCTGCAAGAGCACATGGTAAGTGTTATTACCCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGCTGGAATTCCTGTTGATTATCCTTTCTGATATGCCCAAGGGCTTTATTCATCATGACAAACTTTTTGATCTCTTGGATCGTGTTGGAACACTTACCAGGGATGTATCAACTCTTGTACACGATTTGGAAGAGAAATTAAGGAATAAACAGGGTAACGACCAAACAAATCGTGCAACACTAGACTTGCTAAAAGATATTGAACTCCTCAAGGAAGACCTCAAACATGTTTATCTGAAGTCACCGGATTCATATCAATGTTTCTTCCCCATGAGTGATGGACCGCTCTTCATGCATATGTTGCACCTACACGTAAATGATTTGTTAGATTCAAATGCTTATTCAGTTTCTTTGATTAAGGAAGAAATTGAGCTGGTGAAGCAAGACCTGGAATTCATAAGATCATTCTTTGTGGATGCTGAGCAAGGATTGTATAAAGATATTTGGGCACGTATTCTAGATGTGGCTTATGAGGCAAAAGATGTCATTGATTCAATTATTGTTAGAGATAATGGTCTCTTACATCTTCTTTTCTCACTTCCCATTACCATAAAGAAGATGAAGCTTATCAAAGAAGAGGTTTCTGATTTACATGAGAAGATTCTGAAGAACAGAGGTCTCATTGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGCAAGTCATTGACAACTGATAAAATAGTTGTAGGTTTTGAGGAGGAGACAAAATGGATACTTAGAAAGCTCACTAGTGGACCTACAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAATCAGTTTCTAGCCATTTCGACCTTCATGCATGGTGCACGGTCGACCAAGGATGTGATGAGAAGAAGTTGTTGAATAAAATTTTCAAACAAGTTAGTGACTCAGATTCAAAATTGAGTGAGGATATTGATGTTGCTGATAAGCTACGGAAACAACTGTATGGAAAGAGGTATCTTATTGTCTTAGATGACGTGTGGGATACAACTACATGGGATGAGTTGACAAGACCTTTTCCTGAATCTAAGAAAGGAAGTAGGATTATTTTGACAACTCGAGAAAAGGAAGTGGCTTTGCATGGAAAGCTGAACACTGATCCTCTTGACCTTCGATTGCTAAGATCAGAAGAAAGTTGGGAATTATTACAGAAAAGGGCATTTGGAAACGAGAGTTGCCCTAATGAACTATTAGATGTCGGTAAAGAAATCGCCGAAAATTGTAAAGGTCTTCCTTTGGTGGCTGATCTAATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTTTAAATAATTCGCATTCCTTTATTTTGAAGAATGAAGTGGAAGTGATGAAAGTTATTGAAATAAGTTATGACCACTTATCTGATCATCTGAAGCCATGCTTGCTGTATTTTGCAAGTTGGCCGAAGGACACTATAATGACAATCTATGAGTTGAATGGTTTTTTGGGTGGTGAAGGATTTGTGGGGAAGACAGAGATGAAGAGTATGGAAGAAGTGGTGAAGATTTATATGGATGATTTAATTTCGAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGAGTACCCGACTTACCAACTTCATGATCTTGTGCATGATTATTGTTTGATAAAAGCAAGAAAGGAAAATCTGTTTGATCGGATAAGATCAAGTGCTCCATCAGATTTGTTGCCTCGTCAAATTACCATTGATGATAAGGAGCACTTTGGGCTTAATTTTGTCATGTTCGATTCAAATAAGAAAAGGCATTCTGGTAAACACCTCTATTCTTTGGGGATAAATGGAGACCAACTGGATGACAGTGTTTCTGATGCATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGGACCTGGATAACTCTTTTATCATGGTGAATGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTGGGACAGAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAAATCTTGTCGGTGAATAACAAAGAATCAACCTTGATACTATTACCAAGAATTTGGGATCTTGTAAAGCTGCGAGCGCTGTTCGTGAGTGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATTGCAGAGGACACAAAGTTAGAGAACTTGAGAATATTAGGGGAACTGGTGATTTCCTATTTGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGGTGCTTCAGTTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAATATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAACAACTCAGTGTAAGTTTTGAAAGTTCAAACACAAACCACATTGGGTCCTCTGTAGCGACAAATCGGCCGTGGGATTTTCACTTCCCTTCAAATTTGAAACAACTGTTGTTGTCTGACTTTCCTCTGACATCCGATTCGCTATCAACAATAGCGAGACTGCACAACCTAGAAGAGTTGTCCCTTTATGATGCAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTATGAATCTCAAATTTTTGAACTTGTGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCAGGGATGTGGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCAAAATTGTAAAGAGTCCTCAACTTGAATATTCTGCTCTCAAGATTAAGGAATATGCTGAAGAGATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAAAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAACTTTGCTGGGTGACATTGTATATGACAAATATCATTTGTTAATTTGTCCATTTGAAGTGACTATCTGAAGTTCATATTTTTAAACATTAATCTTGTATACCAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g008790.2.1SL2.50ch06:2722295..27261201,250+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g008790.2SL2.50ch06:2722296..27262373,942+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g008790.2.1.1SL2.50ch06:2722296..272233742+n/a
exonexon:Solyc06g008790.2.1.2SL2.50ch06:2722413..27262373,825+n/a
intronintron:Solyc06g008790.2.1.1SL2.50ch06:2722338..2722412n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17838666%2Fdetails feature 17838666
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