Solanum lycopersicum mRNA Solyc06g071410.2.1
mRNA details
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| Name | Type |
Length
1,722
|
Organism |
|
Description
Protein kinase (AHRD V1 **** Q9FGB1_ARATH); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like
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Location(s)
SL2.50ch06:43930483..43934561
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006468
- Length
- 4079
- Sifter term
- GO:0004708
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g071410.2.1 Protein kinase (AHRD V1 **** Q9FGB1_ARATH); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like
CATTGCTCTGCTCATAATGCTCTCTTCTCTTCCCCCTTCTTCCATACAAACATATTACACCACAAACTCTACTCTTCTCTCTTTACACTACATACCCCCAACAAGCCCTCCTTGTTCTTCTTCTTTTTCAATTCTTCTACTGTGAAACTACTAAAAATCCAATCTTTACAACTTTGCAGAAGCAAAAATGGAGAAGGGCAGTGATGGGTTTGTGAGAGCAGATCAGATTGATTTGAAGAGCTTGGATGAACAACTTGAAAGGCATCTTATCAGAGCAAGAACTATGGACAAGGATAAGAATAAGAAGAAACCACAAGATGATTCTTCCATTAACTACAACATTTCTATTGCTACAGTGGCCAACCACCCCACCACCCCCAACCCCAACCCCAACCTCTCTCTGTTTAGCTCATCTGTTCCTAGGCAAAGATATGAGTGGGAAATTGACCCTTCAAAGCTCATCATCAAAACTGTTCTTGCTCGTGGAACCTTTGGTACTGTCCACCGTGGCGTTTATGATGGTCAAGATGTTGCTGTTAAACTTCTGGACTGGGGGGAAGAGGGACACAGAACAGAAGCTGAAATAGCATCACTAAGGGCAGCTTTTACTCAAGAAGTTTCAGTGTGGCATAAACTTGACCATCCTAATGTAACCAAGTTCATCGGAGCGACCATGGGAGCTTCTGGTCTAAATATACAAACAGAAAATGGTCATATTGGCATGCCTAGTAATATATGTTGTGTTGTTGTGGAATATCTTCCGGGCGGTGCCTTAAAATCTTACCTTATCAAGAACAGAAGAAAGAAGCTAGCATTTAAAGTTGTAGTGCAGATTGCACTTGATTTGGCCAGAGGGTTAAGTTACCTTCATACTCAGAAGATTGTGCACAGAGATGTCAAGACAGAGAATATGCTGTTGGACAAGACACGTACTGTAAAGATTGCAGACTTTGGGGTTGCACGAGTTGAGGCCTCTAATCCTAATGACATGACGGGGGAGACAGGAACCCTTGGCTATATGGCTCCTGAGGTTCTCAATGGCAACCCCTACAACAGGAAATGCGATGTGTATAGTTTTGGCATATGTTTGTGGGAGATATACTGCTGTGACATGCCATATCCTGATCTCAGTTTCTCAGAAGTGACTTCAGCCGTGGTTCGCCAGAATTTGAGGCCAGAAATACCAAGATGTTGCCCAAGTTCCCTAGCTAATGTGATGAAACGATGCTGGGACGCTAATCCTGATAAGCGACCTGAGATGGATGAGGTAGTATCCATGATAGAGGCTATTGACACATCCAAAGGCGGGGGAATGATCCCTGTTGATCAACAACAGGGCTGTTTCTGTTTCCGGAAGCATCGTGGACCTTGAACACTCAGGATCCGTGCAGCTTTACATATAAAGAAGTAGGTTAATTCTATCTCAACTACCAAATATTTCAGAGTCCTGAACTTATATACAGTACCAGATTCTCCTGGTGATTGTGGATATTGGCTGGCAAATTGCGCTGCATTTCTCAATTAGATGGTGTAAAGCTTATACCTTTCTTTTCATTTTCTTCATTTCACTTGTAGTTGTTTGATTTTACTTCTTTTAAATATATAATCTTCCCCAATATTTGACATTGGTGGTTTGGATTTCAAATGAACTTCCACCTTCTCCTATGTATGATTTACACAAGGATAATAGTCAAAACAAAATGAGGGAATTTGCAGCTTCTT
CATTGCTCTGCTCATAATGCTCTCTTCTCTTCCCCCTTCTTCCATACAAACATATTACACCACAAACTCTACTCTTCTCTCTTTACACTACATACCCCCAACAAGCCCTCCTTGTTCTTCTTCTTTTTCAATTCTTCTACTGTGAAACTACTAAAAATCCAATCTTTACAACTTTGCAGAAGCAAAAATGGAGAAGGGCAGTGATGGGTTTGTGAGAGCAGATCAGATTGATTTGAAGAGCTTGGATGAACAACTTGAAAGGCATCTTATCAGAGCAAGAACTATGGACAAGGATAAGAATAAGAAGAAACCACAAGATGATTCTTCCATTAACTACAACATTTCTATTGCTACAGTGGCCAACCACCCCACCACCCCCAACCCCAACCCCAACCTCTCTCTGTTTAGCTCATCTGTTCCTAGGCAAAGATATGAGTGGGAAATTGACCCTTCAAAGCTCATCATCAAAACTGTTCTTGCTCGTGGAACCTTTGGTACTGTCCACCGTGGCGTTTATGATGGTCAAGATGTTGCTGTTAAACTTCTGGACTGGGGGGAAGAGGGACACAGAACAGAAGCTGAAATAGCATCACTAAGGGCAGCTTTTACTCAAGAAGTTTCAGTGTGGCATAAACTTGACCATCCTAATGTAACCAAGTTCATCGGAGCGACCATGGGAGCTTCTGGTCTAAATATACAAACAGAAAATGGTCATATTGGCATGCCTAGTAATATATGTTGTGTTGTTGTGGAATATCTTCCGGGCGGTGCCTTAAAATCTTACCTTATCAAGAACAGAAGAAAGAAGCTAGCATTTAAAGTTGTAGTGCAGATTGCACTTGATTTGGCCAGAGGGTTAAGTTACCTTCATACTCAGAAGATTGTGCACAGAGATGTCAAGACAGAGAATATGCTGTTGGACAAGACACGTACTGTAAAGATTGCAGACTTTGGGGTTGCACGAGTTGAGGCCTCTAATCCTAATGACATGACGGGGGAGACAGGAACCCTTGGCTATATGGCTCCTGAGGTTCTCAATGGCAACCCCTACAACAGGAAATGCGATGTGTATAGTTTTGGCATATGTTTGTGGGAGATATACTGCTGTGACATGCCATATCCTGATCTCAGTTTCTCAGAAGTGACTTCAGCCGTGGTTCGCCAGAATTTGAGGCCAGAAATACCAAGATGTTGCCCAAGTTCCCTAGCTAATGTGATGAAACGATGCTGGGACGCTAATCCTGATAAGCGACCTGAGATGGATGAGGTAGTATCCATGATAGAGGCTATTGACACATCCAAAGGCGGGGGAATGATCCCTGTTGATCAACAACAGGGCTGTTTCTGTTTCCGGAAGCATCGTGGACCTTGAACACTCAGGATCCGTGCAGCTTTACATATAAAGAAGTAGGTTAATTCTATCTCAACTACCAAATATTTCAGAGTCCTGAACTTATATACAGTACCAGATTCTCCTGGTGATTGTGGATATTGGCTGGCAAATTGCGCTGCATTTCTCAATTAGATGGTGTAAAGCTTATACCTTTCTTTTCATTTTCTTCATTTCACTTGTAGTTGTTTGATTTTACTTCTTTTAAATATATAATCTTCCCCAATATTTGACATTGGTGGTTTGGATTTCAAATGAACTTCCACCTTCTCCTATGTATGATTTACACAAGGATAATAGTCAAAACAAAATGAGGGAATTTGCAGCTTCTT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g071410.2.1 | SL2.50ch06:43930832..43934374 | 395 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g071410.2 | SL2.50ch06:43930483..43934561 | 4,079 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g071410.2.1.1 | SL2.50ch06:43934026..43934561 | 536 | - | 2 |
| exon | exon:Solyc06g071410.2.1.2 | SL2.50ch06:43933181..43933302 | 122 | - | n/a |
| exon | exon:Solyc06g071410.2.1.3 | SL2.50ch06:43931910..43932106 | 197 | - | 1 |
| exon | exon:Solyc06g071410.2.1.4 | SL2.50ch06:43931636..43931810 | 175 | - | n/a |
| exon | exon:Solyc06g071410.2.1.5 | SL2.50ch06:43931109..43931243 | 135 | - | n/a |
| exon | exon:Solyc06g071410.2.1.6 | SL2.50ch06:43930483..43931039 | 557 | - | n/a |
| intron | intron:Solyc06g071410.2.1.2 | SL2.50ch06:43933303..43934025 | n/a | - | n/a |
| intron | intron:Solyc06g071410.2.1.3 | SL2.50ch06:43932107..43933180 | n/a | - | n/a |
| intron | intron:Solyc06g071410.2.1.4 | SL2.50ch06:43931811..43931909 | n/a | - | n/a |
| intron | intron:Solyc06g071410.2.1.5 | SL2.50ch06:43931244..43931635 | n/a | - | n/a |
| intron | intron:Solyc06g071410.2.1.6 | SL2.50ch06:43931040..43931108 | n/a | - | n/a |
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mRNA details
mRNA details

