Solanum lycopersicum mRNA Solyc07g052670.2.1

mRNA details  
Name
Solyc07g052670.2.1
Type
mRNA
Length
1,388
Organism
Solanum lycopersicum
Description
Transcription factor (Fragment) (AHRD V1 **** D6MKL1_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch07:61115970..61120548
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4579
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc07g052670.2.1 Transcription factor (Fragment) (AHRD V1 **** D6MKL1_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CAAATAGTATAATAGCAATGAAAACGATGATTGATGAACGATAGCTACATGTCTAGTGAAAAGTAGCACAAATCATGCTGCTCTTCCTAGTCCAGCCAAAACAGCGTTTACTTTTTGAGTTAGAAAATGCAGTAATGACGAAATACAACTTTGTTAATTCTTCCATTGATGCTGCCGTCAGTTCTCCTCCATCCATATCCACACAAAAAAAATACTTTGTTTTTTTGTTATATATATATATGATGTTGCTATTTCAACTGCTACTGTAGTAGATGATTGCTTATACTTGTGGTTTTGTAGTGTGCAGAGCAAAAGGGAAGGGGGAAATTTGAAGAAGGGAATTAGGTCATGGAGGTCGATTCTAGTGGGAATCCTAATTGGTTATTTGATTATGAGTTGATGACGGATATTACTTCTGCTGCATCTGTTACCGTCGCTGAGTTTCAGTCTCCGGCTACTATTGATTTCAGCTGGCCTGCTCAAACGATCTATGCTTCTTCTAATCTCATTACTGAAACAGATTACACATTTGCGGATTCAGAAGTTAGCAAGGAGGCAAGCTCACGAAAGCGGTTAAAAAGTGAATGTTGCAGCTCTCCGAGATCTAAGGCATGCAGAGAGAAATTGCGGAGGGACAGACTGAATGAGAGGTTCCTCGCATTGAGCTCTGTCCTTGATCCTGGAAGGCCACCAAAAACTGAGAAAGTTGCAATTCTAAGTGATGCTCAAAGGATGCTGATTGAGCTGCGAACTGAAACCCAGAAGCTGAAGGAGTCAAATGAGGAGCTGCAAGAGAAGATAAAAGAACTTAAGGCAGAGAAGAATGAGCTCCGAGATGAAAAGCAAAGGCTAAAGGAAGAAAAGGATAATTTGGAGCAGCAGGTTAAAAGCTTAGCTTCTAAAGCAGGATTTCTCTCCCATCCTTCTGCCATGGGAGCTGCATTTACTGCACAAGGACAAGTTGCTGCAGGCAACAAATTGATGCCTTTCATTGGTTATCCCAGTGTTGCGATGTGGCAATTCATGCAACCTGCTGTTGTTGACACATCTCAAGATCATGTGCTCCGTCCTCCAGTTGCTTAAGCTGGATTTGCCAGGTGACTTGCTACTGGAGCTTTGCTCTTTTTGTTGCTCCTGTGAGTGCTAAAAGTGACAAACAACTGAGACAATTTGCTGGTTGTATTTGTATGTCTAGCTTTTATGTATGTGTCAGTCTTGATGGTTTGCTTAATCATGTATATGGCGGGTGTATACTCACCCGAAAAACAATTATGTATTATGATTCCCTAGATGGGATTCCTTCTGAAATAATTAAACTTGGTTGTATGCACATTATACCCTGTTTTAGCTAAGCATGCTTCTGCACTCAGTAGTATATTCTCCTCTGG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc07g052670.2.1SL2.50ch07:61116274..61120200245-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc07g052670.2SL2.50ch07:61115970..611205484,579-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc07g052670.2.1.1SL2.50ch07:61120040..61120548509-1
exonexon:Solyc07g052670.2.1.2SL2.50ch07:61118927..6111898963-1
exonexon:Solyc07g052670.2.1.3SL2.50ch07:61116910..6111698778-1
exonexon:Solyc07g052670.2.1.4SL2.50ch07:61116664..61116826163-n/a
exonexon:Solyc07g052670.2.1.5SL2.50ch07:61115970..61116544575-n/a
intronintron:Solyc07g052670.2.1.2SL2.50ch07:61118990..61120039n/a-n/a
intronintron:Solyc07g052670.2.1.3SL2.50ch07:61116988..61118926n/a-n/a
intronintron:Solyc07g052670.2.1.4SL2.50ch07:61116827..61116909n/a-n/a
intronintron:Solyc07g052670.2.1.5SL2.50ch07:61116545..61116663n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17881914%2Fdetails feature 17881914
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