Clone Read LE_HBa0148N20_SP6_101654

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0148N20_SP6_101654
Primer
SP6
ID from Seq. Facility
LE_HBa_148_N20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
561 trimmed for vector and quality, 941 raw
Genbank Accession
Sequence
>LE_HBa0148N20_SP6_101654 (raw untrimmed)
CGAGGGTTGTTGGTATAATCTGAATCTCTTCACCCCAAATTATCAGTGTTTTCTGCTTGACCTGCAGGAGTCCCCTTTTTGAGAATGCTGAACAATTTTC
CATCGTGACAAGACCCCTACCAGTAGACAACATAGAAAATGAAGTTACAGCTAGAAATGCCATGTAACAGCAGAATCAGAAGCAAGTTGAATCCATCAGT
CTCAAGATCACAGTAGTCTACATACCACATGAATGATTTTAATGACGTCTAAAGCTAATAGGTTTGTAACTCCAAGAGATGTTTGCAGTTAAACTTATGG
TGTATCACTTTATGCCATCTCTCTTATTTAAACAAATTTTTCAGAACTAATATCAGTGCCCACAGGTTCCTGTATTTAGACTCCAACAATTGCATGTTAA
GATGAAACTAGTAAGATCAAACTCAATATTGGTAGTTTTCATAATCAAATCAATGCCTATTAAATAGAGCAAGATAATGCTGTTTGATACTAGTCTATGC
CAAAAAAAGTGACAAAAGGCATGTATATTTAGGAATAACTTGAGAAAATTTAGTAAATCTTCACATACATGTTCTATCTGAGAAATGACATTGTAAACCT
CCACTGAATCAGAAAATCACCAATGCATCCTCCCACCCAGGGAAGGAACAAGGTAAGCGGCCCAACTGGATAGAAAACCGATAATCAAAAGGGAAAACAA
AAGAGAAAAAAATATGCCAAAACACATTTGAAAATCCGATCTCCCTGACTTTAAGGGTCCTAAAAAAATCAAGGGGCCAACTACCTTATTCCCGTCATGC
AGGCACTAAAGGTAAGCCTTGAAAGGTAATGAAATTGCCAAAAGCGAAGTGGGAAATTTTCAAAAATAAAACGCCACCGGTATTTCCCATAACAAGGCAA
AGTTCTCTCTTATTTTATAGGTTCGTACTATAAAAATTGCT
>LE_HBa0148N20_SP6_101654 (trimmed for quality and cloning vector)
TCTTCACCCCAAATTATCAGTGTTTTCTGCTTGACCTGCAGGAGTCCCCTTTTTGAGAATGCTGAACAATTTTCCATCGTGACAAGACCCCTACCAGTAG
ACAACATAGAAAATGAAGTTACAGCTAGAAATGCCATGTAACAGCAGAATCAGAAGCAAGTTGAATCCATCAGTCTCAAGATCACAGTAGTCTACATACC
ACATGAATGATTTTAATGACGTCTAAAGCTAATAGGTTTGTAACTCCAAGAGATGTTTGCAGTTAAACTTATGGTGTATCACTTTATGCCATCTCTCTTA
TTTAAACAAATTTTTCAGAACTAATATCAGTGCCCACAGGTTCCTGTATTTAGACTCCAACAATTGCATGTTAAGATGAAACTAGTAAGATCAAACTCAA
TATTGGTAGTTTTCATAATCAAATCAATGCCTATTAAATAGAGCAAGATAATGCTGTTTGATACTAGTCTATGCCAAAAAAAGTGACAAAAGGCATGTAT
ATTTAGGAATAACTTGAGAAAATTTAGTAAATCTTCACATACATGTTCTATCTGAGAAATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94592
Expected error %
0.285087
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0148N20
Clone
Clone name
hba-148n20
LE_HBa0148N20
P148N20
Clone type
BAC
Contamination
none
Estimated length
76,753
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found