Clone Read LE_HBa0172G20_SP6_104390

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0172G20_SP6_104390
Primer
SP6
ID from Seq. Facility
LE_HBa_172_G20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
569 trimmed for vector and quality, 959 raw
Genbank Accession
Sequence
>LE_HBa0172G20_SP6_104390 (raw untrimmed)
CCCCGGTTTTCCCTATTTTCTTATTGCAGTTTGTTAGATGTGTGTAGTTGAAAACTGGGGAAGTGAGGAATTTTGTTGAAAACTGTGATATCAAAGCTAT
AATAATAGAAAGAAGTATTTATTTTATGGCAAGTGTAGATCTTGATGGTGGGGATCTTTGCATTAGAGGAAGGAGTAAAATGAGTTGGAACGACCAAAAC
TGAGTTGGGTCAAACAAATTGGGATTGACAATAGTGTCATCTTTGTTTGAGTTCATGTTTGTTGAGATAATAGTTAGTAACTAATAAGTGTTTTTGCGAC
ATGATATCTTGTTTGATCTCTGATATGATCAATTATTTGGCAGTTGGAGAAGTGGAAGGCCTTAAGAGGAATAACCAATGCTAAAATAATAAAACCCAAC
CTTCTCAAAAAAAAATAAAAATCCCAAGTATTTTCTTGTCTTTTTTAAACCAATCATTATATGCAGCAGGGATTTGTCGTGTCAATGCGACTATCTTTAT
GGCCCTCCAAGAGGACTTTTGAGAAGAGGTGGAAGAAAGCTTCAATGCTTCTAAATCTTTTTCACCACTGCTTCTAGATGATAAAATGATAATTTTGCTA
AGAGCCTTTTGTTGTACAGGTACCAGGATGGTGGTCTCCTGTCAGATTAGCAGATGGCGTTGTTACAATATCTACTAGATAATATACTCTTTTTGGGTGA
TGAGGTAAACCATAATAAATAACTCCCACGATCTCGCCGGCCATATTTCTACCCATACTTCTCCGAGGTTGGCGAAGTTCCAAGAAACCATCTTTTCCGG
CGCCTTCTGATCGAATCCTGTACTACTTCACTGTTACACAGCAACTTTTGTTTATAACCTTCCAACCTGTTACATCACCCCTCCTCGTCATCTTCTTCTA
TTTTTCTTTCTCTTTATTATCCTTATTCTGCTATGTTCTTCGTCTTTGTTGTCGACCTG
>LE_HBa0172G20_SP6_104390 (trimmed for quality and cloning vector)
TTTGTTAGATGTGTGTAGTTGAAAACTGGGGAAGTGAGGAATTTTGTTGAAAACTGTGATATCAAAGCTATAATAATAGAAAGAAGTATTTATTTTATGG
CAAGTGTAGATCTTGATGGTGGGGATCTTTGCATTAGAGGAAGGAGTAAAATGAGTTGGAACGACCAAAACTGAGTTGGGTCAAACAAATTGGGATTGAC
AATAGTGTCATCTTTGTTTGAGTTCATGTTTGTTGAGATAATAGTTAGTAACTAATAAGTGTTTTTGCGACATGATATCTTGTTTGATCTCTGATATGAT
CAATTATTTGGCAGTTGGAGAAGTGGAAGGCCTTAAGAGGAATAACCAATGCTAAAATAATAAAACCCAACCTTCTCAAAAAAAAATAAAAATCCCAAGT
ATTTTCTTGTCTTTTTTAAACCAATCATTATATGCAGCAGGGATTTGTCGTGTCAATGCGACTATCTTTATGGCCCTCCAAGAGGACTTTTGAGAAGAGG
TGGAAGAAAGCTTCAATGCTTCTAAATCTTTTTCACCACTGCTTCTAGATGATAAAATGATAATTTTGC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.942539
Expected error %
0.26213
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0172G20
Clone
Clone name
hba-172g20
LE_HBa0172G20
C12HBa0172G20
P172G20
Clone type
BAC
Contamination
none
Estimated length
123,954
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found