Clone Read LE_HBa0172G20_T7_104391

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0172G20_T7_104391
Primer
T7
ID from Seq. Facility
LE_HBa_172_G20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
548 trimmed for vector and quality, 961 raw
Genbank Accession
Sequence
>LE_HBa0172G20_T7_104391 (raw untrimmed)
GTATACTGGGTCACGGGGGTATCTCCTAGAGTCGACCTGCAGGCATGCAAGCTTATATACGCCACCTGGTTTACCCATTAAGGATGGAAGGGAACAAAAA
CCACATACCTCATGGACTTTAGCAGATATAAAGAAAGAGATCACCATTGCAACTCCCTGCACCAAGAATCAAGTGGCAATTAAAACTAATTCAACAGATC
ACAAAATAAGATCTAGTATACAATAGTAAGGCCAAAACTTTTGTAAAGTAGAAAGCGGATAAAACTATACAAAGCAGCGACTAGTGCTTGATACCAGGCA
TACACTTAAAACTCAAACTGAAAAATAAATGACATGAAAGATATGAAGTATAATGTGGACCCAAAAAACACTTATTTGATCGTATATTATACTGTTCTCA
CTTCTCTGTCACAAAACATAAATACTAATAGCACTTTAACCTTCATCAGGAAAAAAACTTTTTCATCCATGTCTCGTGTATATCACCATATTAATCGCAC
ACAAGCTTATCAGAAAAAATAGCTTATGTGCTCTACTTTGAAGTGCATTTCATTATCTAGCAAGATCACTCGAGTTAAAGTGTTGACAAACACATCGAAG
CTTGTTTCTTCAATATGCAAGTCTCTATGTCCCTTGCTGTCTATCATCATTAACTTCAATCACATCAAATTCTTTTTTTATTTTTTTGTTTTTTCTTTTT
TTTTTTTTTTTTTTTTTTTTTTTATTTTTCAAAAAAAGAAAAACAAACGATAGTGGAAAGAAAAATTTCTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTT
TTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTATTTTATTTTGTTTTTTTTTTTTTT
ATTTTTTTCTATATATCTATTTTTTAGCCCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTC
>LE_HBa0172G20_T7_104391 (trimmed for quality and cloning vector)
AGAGTCGACCTGCAGGCATGCAAGCTTATATACGCCACCTGGTTTACCCATTAAGGATGGAAGGGAACAAAAACCACATACCTCATGGACTTTAGCAGAT
ATAAAGAAAGAGATCACCATTGCAACTCCCTGCACCAAGAATCAAGTGGCAATTAAAACTAATTCAACAGATCACAAAATAAGATCTAGTATACAATAGT
AAGGCCAAAACTTTTGTAAAGTAGAAAGCGGATAAAACTATACAAAGCAGCGACTAGTGCTTGATACCAGGCATACACTTAAAACTCAAACTGAAAAATA
AATGACATGAAAGATATGAAGTATAATGTGGACCCAAAAAACACTTATTTGATCGTATATTATACTGTTCTCACTTCTCTGTCACAAAACATAAATACTA
ATAGCACTTTAACCTTCATCAGGAAAAAAACTTTTTCATCCATGTCTCGTGTATATCACCATATTAATCGCACACAAGCTTATCAGAAAAAATAGCTTAT
GTGCTCTACTTTGAAGTGCATTTCATTATCTAGCAAGATCACTCGAGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.9522
Expected error %
0.854577
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0172G20
Clone
Clone name
hba-172g20
LE_HBa0172G20
C12HBa0172G20
P172G20
Clone type
BAC
Contamination
none
Estimated length
123,954
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found