Clone Read LE_HBa0189P05_T7_107097

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189P05_T7_107097
Primer
T7
ID from Seq. Facility
LE_HBa_189_P05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1177 raw
Sequence
>LE_HBa0189P05_T7_107097 (raw untrimmed)
AACACACGATCCGCGCCTTTCTTATATACGAGACCGCTGCGGATTCTCCTTAGAAATACGTGCCTGTCTTCGCTAAGACAANGCCTCTCTCTATCAGTTA
TTAATCCTCCTAACCCCTAATGCTACGCGTGAGACAGTCGATATCAACAGAAGGGGACGTCACCACAAGGGGAACTCCCTATCCAAACACTCACGCCATT
TCTACCAAATGCGTGCCGCTACTCCACACGGAAGATAGCATGAGAGGAAAGTAGGTAGGGAGAGCACTATGCATTAATGTTTCTAGCACTATGCTAATCG
CACATCTAATGCGTGCATCCTTAGATGCACGCATGCGAGTGTTTGTGTCAGTATAAGCATTGAAAACTAATACCTAATTACATATTTATACGCGCGCAAT
ACTGCCGCTCCTCTACTCATCCCCTATCCTTCTCTCCCTGAGCTGTTGCGTTGGGCACTAATTACTTATATCGTTGTTGATTTCTTGTTATACGGCTGGA
CTATGACTCACACGATATTATACTTGATACCATCCTGCGTGACGACCTGATAATCCTCGGCTCTTAAATGTACCATCCTCCTCTAACCTCATAACTACAT
AACAACTCTAAGTAGGTCATCCCCGCGATTTTTACTATCACAATTATACTAACAAGCGATGGATACACACAATACAAACACCCAACTAGTGTGTTATTGA
GATCCTCCGCCCAACAAATATCGATGTTAGACCGTATCATCCTCCCTAAAAACATCTAAAATGTACTCTCCTGTACTGCATACACACCATTGGTCGCAAC
CACTCTGCTTGATATATCTTTCATACTATCACTTACTTCAAGCTACGATCAACCGCACACATACAATACACACATGACTATACCAAGCGATAGTCAACAT
CCAACCTGCGTCGATAGGGTCTAAGTAAACAACGACTAATCCCACTCACTCTCTTCGCTGCCTTACTCGTATAATACATCACTGACTTCTATACACTATC
CACATAGACGTTAATTACTCTATTCACGACGATCTATCTATTGAATCACTTTTGCTTTACCTAACGCTTCAACCCTAAACCGACATAGATTGCTGCTACA
CCTCCTCCTAACAGATAATGCTAGAGGATACTAGTTAACAAGCCAGGCACGCTATAGTTCTCTAAAATCTTAAATTA
>LE_HBa0189P05_T7_107097 (trimmed for quality and cloning vector)
CT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.57142
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189P05
Clone
Clone name
hba-189p5
LE_HBa0189P05
C02HBa0189P05
P189P05
Clone type
BAC
Contamination
none
Estimated length
47,743
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found