Clone Read LE_HBa0190P06_SP6_107866

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190P06_SP6_107866
Primer
SP6
ID from Seq. Facility
LE_HBa_190_P06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1395 raw
Sequence
>LE_HBa0190P06_SP6_107866 (raw untrimmed)
ATCAAAAAAGATAAAAAATTCCGCGTANTTTTTCTNCAACAAGGATCNATCCNCATCNNNNNNNNNNTNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCTTATTACTCTTNCNTTCCTCCNTTACTCTTCTTTTCCCTTTTCNCTTCTTAT
CACTCTATCTTATCCCCTATCACAAATATACACCTTCAACANCCATACACACATTNCACACAANTTTTATCAATAACTCTATAACACTATCATCATTCAC
TATTATTACACAAAACCTCTTAACAATATACTAATATCAACACTACATCACTCTTATACTCTATATATTAACATACTCTTACTTCNTAATACTATTTAAT
CCTATTTAACCTATCAATAAATCATCATATTATACTCACCCTATTATTATCTCTAATTACTCATTTCTTACCCATCCACTCANATACTTNTCTATCACTC
ANAATTCCTATAAACACATACATAATAAACAAAATTACCTCATAAACTCTTACACATTATATCCTATTCATACTTTCTCTATATTTATACATAAATATTA
ACTACTCACAANCATATCTTAATATTTCATTCTCTTAAAACCACTATCTTACATAACACCTCTAACAATACTATACATCAATATCTATANATCACTTNCA
TTATAACACTCTATCTATCTTAACTACCTACATTTATCTCATACTCATCTCCTATATTATTCCCATACNTCCTAACTTAACCAATNTCCTATATATTACA
AAACCAATTATTTATATACANCTCTCNCTCATATCTTTTACTCTTACTCTACTCCTAAAACTCTCACTCTAATTATCATAATTTAATCTTATCATATACA
TTTCTCTACTAAAATATTAACACTAACCATTCATTCATAACTAACACTACTATCTTAACACCTTATCTCACTCATATACATATTAAATCCACACATCATA
TTTCTTCACCATTCAAAAAACACACATTTTATACTCCTACATCTTTCTTCCCCTCACTACCTACATCAACACCCTCCTCCTCTTACCCTATCACACCTTC
TCTTCTTTATTTTCACATCTCAACATCTTACCCTCAACAAATCTTACTAAACTAAATACATCAAACTCATTTCAACANCTCCNATTATCCTTAAATTNAC
ACACACCACTATAATATAATACNTATAAACCATCTAATTACCATAACTATTATCCACATTTCTAATATTCATCTAATCATACTCTCTCCACTTTTCCCTT
AATTCTACAATATATCATCCTTTATTTCTATTCTTTTAATTTCTTTATTCTATCATCATACCTTTCACCACCCATACTTCTACCCTATTAAAATA
>LE_HBa0190P06_SP6_107866 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.30601
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190P06
Clone
Clone name
hba-190p6
LE_HBa0190P06
C08HBa0190P06
P190P06
Clone type
BAC
Contamination
none
Estimated length
97,889
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found