Clone Read LE_HBa0190P06_T7_107867

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190P06_T7_107867
Primer
T7
ID from Seq. Facility
LE_HBa_190_P06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 1123 raw
Sequence
>LE_HBa0190P06_T7_107867 (raw untrimmed)
TTGTCATTATATATATTTTATATGGGTTCTCTGGCGGCTATTTACTAGAAGTTCAGGCTCCATGGCTATGCAAGTCAGTTAATATTATGGATATTTGTGC
CCCCTTCTTTTAACGAGAAGACACCTTAGTAAGAAGGTAGGATAGAAATAGTGTACCTTTTCCTACGACGCCCATGAGAGCTGACATGGATGTGCTGCCA
TGGATGATCAACAGAGTTATCATATGTTTATAAATACTATACTCATACGGCTGATTTGAATACACGAATACACTCCCCTTCATTAAATATCAGTTATCAA
CATAGTATTAGTATATTTACTCTTTTTAGAAGTATAGTAGTTGTCATATGTATTCTGTTGTAATAATGATGAAATGACCCATGTCGAGAGGGTGAGGGGA
ATGATCTGGTGTGCCTAGCTAAGGTGTGTGTGGGAAGCATGCGTACGTATTATGAGATAGCTACTACGCTGCGGTTCAACAGAGAGAGTGATATTATTTT
TGTTATTTTTTTTTTTTTTATTTTTTTATTTTTTTTTTTTATTGTTTTTTTCTTTTTATTTTTTTTTTTTTTTATTTTTATTTTTGTTTCTATTTTTATA
TTTTTTATAACTGGATGCACCTTAGTTGTTGTGTGTGGTTCTCGCTTACCCCGTCTATGTACCCTATATTTTGAATATCTATCAATAAATAAGCCAGGAG
TGTGTTGCAATGTGGTTACCTACTGGCTTATGATCTACGTGACTATGAGAACTGTTTATAATTTATTAGAAATAGATTAACAAACGAAGAATATTAAGCA
GATGAAACAGTAATTGCAGTAGATCTGAATTCATGCGTATTTGTCGAGCAGAGTGAGGACCTTAT
TTTTTTTTTTACTGAAAGCTGAAGACAGATAATGA
GAAAGCTATTCGTAACTGTTGACAGTGACAATATTCGTACAAATGAGTACTAAAGTAATCATGATACAGAACGTATACCACATAGCGCATGGCTGACCCG
CAAAGACAATTCACTCGCAGCCGACTGGGTGCTATCTACCGACATCTCCACTGACATGTTTTGATCTTATGAATCTTAGTATTATAAGGAGCGTAATCTA
ATGAATATGATGTGAATTAATTT
>LE_HBa0190P06_T7_107867 (trimmed for quality and cloning vector)
TTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.745281
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190P06
Clone
Clone name
hba-190p6
LE_HBa0190P06
C08HBa0190P06
P190P06
Clone type
BAC
Contamination
none
Estimated length
97,889
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found