Clone Read LE_HBa0194F03_SP6_109676

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0194F03_SP6_109676
Primer
SP6
ID from Seq. Facility
LE_HBa_194_F03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
0 trimmed for vector and quality, 932 raw
Sequence
>LE_HBa0194F03_SP6_109676 (raw untrimmed)
CATTAATGGTTGCCTGCAGGTCGACTCTAGAGGATCCCCGGGTACCGAGCTCGAATTCGCCCTATAGTGAGTCCTATTACAATTCACTGGCCGTCGTTTT
ACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACC
GATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGT
GCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGAACCCCTTGCGGCCGCATCGAATATA
ACTTCGTATAATGTATGCTATACGAAGTTATTAGCGATGAGCTCGGACTTCCATTGTTCATTCCACGGACAAAAACAGAGAAAGGAAACGACAGAGGCCA
AAAAGCAAGAAATCAGCACCTGTCGTTTCCTTTCTTTTCATAGGGTATTTTAAATAAAAACATTAAGTTATGACGAAGAAGAACGGAAACGCCCTAGGCC
GGAAAATTTCAAAAAATAGCGAATACTGCGAAGGCTCCGCTCCTTAATCTGTCTGAATTCTGGATAGGACTCTTTTATGTCAATGTATTCTATTTACACC
ACACATCTTCTGGTAGGTCTCTAACTTCTCTAGTACTCGTTATGGATTTGGTTGATTGGAGTGGTCTGGATTAAGAAGACGATAAGGTCGTCTTTCCCCC
CACCATTAGTTAAGTTATGGTTTAATTTTTTGTTTTTTTTATGTTTATATTATTTGTTATTTTTTGTTGTTATATGTTTTGATTGTTTGGTTAGTTTTTT
TTGTGTTTTTGTGTGTTTTGTTTTGTATATTA
>LE_HBa0194F03_SP6_109676 (trimmed for quality and cloning vector)

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Probable foreign DNA contamination
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
3' read, short insert
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0194F03
Clone
Clone name
hba-194f3
LE_HBa0194F03
P194F03
Clone type
BAC
Contamination
none
Estimated length
93,754
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found