Clone Read LE_HBa0194F03_T7_109677

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0194F03_T7_109677
Primer
T7
ID from Seq. Facility
LE_HBa_194_F03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
539 trimmed for vector and quality, 798 raw
Sequence
>LE_HBa0194F03_T7_109677 (raw untrimmed)
TTTGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAGTGTAGATTTTAATAAATCATTTTAAGTTCCGAAATCATGAAACTTGGTCC
ACCTATCACCTTTATGAGAGAATTTGGGTTAATTGCCAAATATTTACCTAACAATAACGAATTATATGAACAAATATTATTTGTTGATTCTTTTCTTAAT
TTTACAAGTTCTTAATTTCTTGTTATTATACTTGTATAATTCTTTTTGTTATTATTGTTTTTTTTTATGAGCATTTATAACGCGACTATTTTATCTTGTT
CCATTAAATTATCATACTCAATCGGACATCCATGGTACAACTTATTATTACTTATTAATTAAACTAAAACCAAATCATTCTATATTAATGACCAAAATCA
ATTAGTAATTAATAATTTTTTGATCTAATATATTAAGAAATTAAAAATTGATAAATCTAATTGAGAATATTTCGATATGGAGGGTGAGGAAATAACAAAT
CTTTTGTGCATAATTATAGTATCCACATACTCAAAACTAAAACAAATAGTTTGGACAATAATAATTAGATCATCCAAGTGGTACTCATCAATTGTATACA
TATAATTTTTCATCTTGTGTATTTATTGTTTTATCATTTTCTTTTTTGTTTTTTGCTTTTTTTTTTTTTTTTCGTCTTTTCTCTCTCTGAAAAATCTTTT
AACAAATTAATCTAACAATCCCTTACCCTTTCTTTTCCCTTCGCACACTTATTTCATCCTATTCCTTACTCTCCTCATTCCCTTCTGTTATATTCCGT
>LE_HBa0194F03_T7_109677 (trimmed for quality and cloning vector)
AGCTTAGTGTAGATTTTAATAAATCATTTTAAGTTCCGAAATCATGAAACTTGGTCCACCTATCACCTTTATGAGAGAATTTGGGTTAATTGCCAAATAT
TTACCTAACAATAACGAATTATATGAACAAATATTATTTGTTGATTCTTTTCTTAATTTTACAAGTTCTTAATTTCTTGTTATTATACTTGTATAATTCT
TTTTGTTATTATTGTTTTTTTTTATGAGCATTTATAACGCGACTATTTTATCTTGTTCCATTAAATTATCATACTCAATCGGACATCCATGGTACAACTT
ATTATTACTTATTAATTAAACTAAAACCAAATCATTCTATATTAATGACCAAAATCAATTAGTAATTAATAATTTTTTGATCTAATATATTAAGAAATTA
AAAATTGATAAATCTAATTGAGAATATTTCGATATGGAGGGTGAGGAAATAACAAATCTTTTGTGCATAATTATAGTATCCACATACTCAAAACTAAAAC
AAATAGTTTGGACAATAATAATTAGATCATCCAAGTGGT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.8868
Expected error %
3.99633
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0194F03
Clone
Clone name
hba-194f3
LE_HBa0194F03
P194F03
Clone type
BAC
Contamination
none
Estimated length
93,754
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found