Clone Read LE_HBa0191E15_T7_114261

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191E15_T7_114261
Primer
T7
ID from Seq. Facility
LE_HBa_191_E15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
179 trimmed for vector and quality, 923 raw
Sequence
>LE_HBa0191E15_T7_114261 (raw untrimmed)
ATTGGTTCTCCAGGGGGTTCCTACTATAAGTCTACCTTGCNGGCTGGCAAGCTTTATCGCCAAGTTCTCTAAGTCGCTATTTTTGGCTAGATAGCAGTGT
CCTATCTTGGGGCACGTGGTTTCTAAAGAAGGAGTGATGGTGGATCCTTCTAAGATTGAGACAGTGAAGAATTGGGTAAGACCTACTAATGTGTCAGAAA
TAAGGAGCTTTGTTGGGTTAGCTAGCTACTACCGCCGATTCGTCAAGGGATTCTCTTCTATTGCTTCCCAACTGACGAACTTGACTAAGCAGAATGTTCC
GTTTGTATGGTCGGACGAATGTGAGGAAATCTTTCATAAGCTCAAGATTTTGTTTACTACCACATCTATCCTTACCTTGCCAGTAGAGGGTAAGAACTTT
ATTGTTTAGTGTGATGCATCCTATTCTGGTTTGGGTGCAGTACTAATGCTATAGAAGAGTGTGATTGCTTATTGTTCTATGCCATTACTGGTGTATGATC
GTAACTATACTTACTAGGACTTGTAAGTTGCTGCTGTATGTTTGTATTTAATATTGGAGACCTATTTTTATGGCGCAGTTTTGATGTTCTCCTGATCATC
TTAGCTTGAGATGTCTATTTTATCAATATTCACTCTATAAATAGATTCGAGTGATATCTCTTGCTACTAGTTATTCTTATTATCTACAAAAAACACATCT
GCAATTATTACGATATAATCGCTTGATATACTAATCTCGCCCAACTATGTACTATATTATGCCACCCCCTCTACAATATAAATTTATGTTTGGATTTTGT
GTAATTGACACTCCTCGATGTTCCCATTCGTGGTGTGGCGTCATCTCTTGATGCTCTTTCCTCCCTTTCCATTTCTGTCATTACTTGATCACTACTTGCG
TGTTTTTCTTCTTCCTATATTCN
>LE_HBa0191E15_T7_114261 (trimmed for quality and cloning vector)
TTGGGGCACGTGGTTTCTAAAGAAGGAGTGATGGTGGATCCTTCTAAGATTGAGACAGTGAAGAATTGGGTAAGACCTACTAATGTGTCAGAAATAAGGA
GCTTTGTTGGGTTAGCTAGCTACTACCGCCGATTCGTCAAGGGATTCTCTTCTATTGCTTCCCAACTGACGAACTTGAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972549
Expected error %
0.479
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 96 E Value 2e-19 Identity 24.90% Align. Length 176bp (98.32%) Frame 2
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 94 E Value 9e-19 Identity 23.70% Align. Length 176bp (98.32%) Frame 2
putative polyprotein, 3'-partial [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191E15
Clone
Clone name
hba-191e15
LE_HBa0191E15
P191E15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found