Clone Read LE_HBa0011H06_SP6_121124

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0011H06_SP6_121124
Primer
SP6
ID from Seq. Facility
LE_HBa_011_H06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
714 trimmed for vector and quality, 993 raw
Genbank Accession
Sequence
>LE_HBa0011H06_SP6_121124 (raw untrimmed)
AAAAAAAAAAAGGTTTNCTCCCGCTATGTGAACANNNNANANNNNNNNNNAAAAACNCNNGTNCNAATCNTCCTTTTCCTGCATTATAATCTGAAGAAAT
CAANTTCAACTTTACANAAAACATCNAAATTCATTCAAAATCAACACAAAAAATCATCTGAACAATTGCAGGTAACCTAAAACTACAATACTGATGAGAT
AATCTCCGATTTTTGAGCAAAATGATGAAAATTGTTAGGAAAATCTCGAAATACCTGAAGAAATACTCTACTAGCAGCTGAACCTTTCTCTTCCATAGCT
GGTAACAAGCAGAGACGCAATTTTGCGGAGCTAATTGGGGCAACAGTGGCGGGAAGTTTAGAGTGAGGAGTGGAGTTGAACTGCATATATACTGATACTA
CTACTGTAATTTACATTTTTTCTTTTTTTTAAGTTAAATAAAGCTAGTCGTGAAAAAATTTGTTATATATAATATAATGAAAAAACGTCTGAAAAATATT
TTATTTTTATAAAATTATAGTTACGATATCAAATTTTTATCCCTGCACTTCCCTAATATAATCAAATCAAAACTATAATTATTCTACATAACATAAACAC
TTCCTATGATATTTTCTTCTTAAATTAGTCTTTCAAACAGCACCATTAAAGCAAACTATAGGTAGAGTAACGAATTTCTCAAATATGAACATATTTAAAA
TTTTAAATTATCCAATAAAACATAAACATTTCCTTATGAAAAATATAATATTTTCTTCTTAAATTAGTTTTTCAAACAGCACCATCTAAACTTATTTAAA
TTTTCAATTTTTGACCATTAAATATGAGAATTAAGAAACTAAACTTTTCAGTTTTGTAACAATGCAATAATCTCGATTTACAATTCACCTGAGGTAGAAA
TAGAGGATTACACAAATTTTAATTTCTGAACCCAATAAACATTTCAATTTTTACTTAAATGGTGAAATTTAAATTTTTCTAAGCCTAACCCCG
>LE_HBa0011H06_SP6_121124 (trimmed for quality and cloning vector)
TCCTTTTCCTGCATTATAATCTGAAGAAATCAANTTCAACTTTACANAAAACATCNAAATTCATTCAAAATCAACACAAAAAATCATCTGAACAATTGCA
GGTAACCTAAAACTACAATACTGATGAGATAATCTCCGATTTTTGAGCAAAATGATGAAAATTGTTAGGAAAATCTCGAAATACCTGAAGAAATACTCTA
CTAGCAGCTGAACCTTTCTCTTCCATAGCTGGTAACAAGCAGAGACGCAATTTTGCGGAGCTAATTGGGGCAACAGTGGCGGGAAGTTTAGAGTGAGGAG
TGGAGTTGAACTGCATATATACTGATACTACTACTGTAATTTACATTTTTTCTTTTTTTTAAGTTAAATAAAGCTAGTCGTGAAAAAATTTGTTATATAT
AATATAATGAAAAAACGTCTGAAAAATATTTTATTTTTATAAAATTATAGTTACGATATCAAATTTTTATCCCTGCACTTCCCTAATATAATCAAATCAA
AACTATAATTATTCTACATAACATAAACACTTCCTATGATATTTTCTTCTTAAATTAGTCTTTCAAACAGCACCATTAAAGCAAACTATAGGTAGAGTAA
CGAATTTCTCAAATATGAACATATTTAAAATTTTAAATTATCCAATAAAACATAAACATTTCCTTATGAAAAATATAATATTTTCTTCTTAAATTAGTTT
TTCAAACAGCACCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.925594
Expected error %
1.2142
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0011H06
Clone
Clone name
hba-11h6
LE_HBa0011H06
P011H06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found