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Clone Read LE_HBa0011H06_T7_5549

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0011H06_T7_5549
Primer
T7
ID from Seq. Facility
LE_HBa_011_H06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
828 trimmed for vector and quality, 984 raw
Genbank Accession
DU025188
Sequence
>LE_HBa0011H06_T7_5549 (raw untrimmed)
GCCAACCTGGGTCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTTGTCCATTTTTATCAAAATATTGATTAAATACTATATTAATATAA
AACAAAGCAAGATAACTTTATTTCGTAATTTTCTTAACTTGAGTGATTATTCAATAAAAAAAAATTATTCAATAGTTCAAGTAAATCGATCCACGTATAT
ATTAGAACTTTCTTTTAGGGAAGAGATACATCATTTTTTAGGATTAAATGGTCCATTAAGTATCTAATTAGAAAAATAACAGTTTTATTATCTCAAAAGG
GAAAAATTGAAATAATTCAAAAGGGGCAATGTAAATTACAACATATAAGGATCCATATAGGATTGGGCCTGCACGAAATTATGATTTTGGATCCATGGCC
CAATGGCTTGTGCTAGGTTCTAGTGGGCCGAAGTGTATATATATAGTATAAATTTAAGGAATCCCATAGTGTAATTCAATAATTACATTCTGTCCCGACA
AGTTTAGTAATTACAAAAAATCCCTTAAATGTGTTGAGCCGTGATACTTTAGATTGTAGTGATACATGGTAAATGATACATGGTAATTTAAAACTGTTGA
GAAAAAATAGGGAGAAAAAACGGTAAAGTTATGTTGTTAGTAAAACAGCTTAATTTGTGGTAACAGATCATTAATCAACATTAAATCAGCAATTAATTGG
ATATTAATTTCAAATTTTTATCATGCCCCTTCTCAATTCTCATCTTATGTTTGTTTGTTCGAACAAACTATCAATTTATTTGACACCTTTTTTTTAGTTG
AATTATTGAAATTTTATCCATTTTATAGTCGCACAAGATATATAATATATCATTTCATTACTACTTTGGTGCAGTCGGAAGATGATGGACAAGGTGGGAG
AAGGAAGAAGAAAGGGCTGAAAAAGAGATAAGGAGAATTCACAGGTGGAAGCCAAGAATGAGGACACATCACAAGCCCTGGTGT
>LE_HBa0011H06_T7_5549 (trimmed for quality and cloning vector)
AGCTTGTTGTCCATTTTTATCAAAATATTGATTAAATACTATATTAATATAAAACAAAGCAAGATAACTTTATTTCGTAATTTTCTTAACTTGAGTGATT
ATTCAATAAAAAAAAATTATTCAATAGTTCAAGTAAATCGATCCACGTATATATTAGAACTTTCTTTTAGGGAAGAGATACATCATTTTTTAGGATTAAA
TGGTCCATTAAGTATCTAATTAGAAAAATAACAGTTTTATTATCTCAAAAGGGAAAAATTGAAATAATTCAAAAGGGGCAATGTAAATTACAACATATAA
GGATCCATATAGGATTGGGCCTGCACGAAATTATGATTTTGGATCCATGGCCCAATGGCTTGTGCTAGGTTCTAGTGGGCCGAAGTGTATATATATAGTA
TAAATTTAAGGAATCCCATAGTGTAATTCAATAATTACATTCTGTCCCGACAAGTTTAGTAATTACAAAAAATCCCTTAAATGTGTTGAGCCGTGATACT
TTAGATTGTAGTGATACATGGTAAATGATACATGGTAATTTAAAACTGTTGAGAAAAAATAGGGAGAAAAAACGGTAAAGTTATGTTGTTAGTAAAACAG
CTTAATTTGTGGTAACAGATCATTAATCAACATTAAATCAGCAATTAATTGGATATTAATTTCAAATTTTTATCATGCCCCTTCTCAATTCTCATCTTAT
GTTTGTTTGTTCGAACAAACTATCAATTTATTTGACACCTTTTTTTTAGTTGAATTATTGAAATTTTATCCATTTTATAGTCGCACAAGATATATAATAT
ATCATTTCATTACTACTTTGGTGCAGTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.91647
Expected error %
0.305336
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0011H06
Clone
Clone name
hba-11h6
LE_HBa0011H06
P011H06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found