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Clone Read LE_HBa0175B09_T7_124055

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0175B09_T7_124055
Primer
T7
ID from Seq. Facility
LE_HBa_175_B09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1212 raw
Sequence
>LE_HBa0175B09_T7_124055 (raw untrimmed)
TTGATCTGTAGAATATGGTAAAGCTCCATCGGAGACTATCCCTATCTGATGTACTCTNGTGATCATATCTTGTATCCACCGCCATAATAATGAACTTTTG
CATATACTCCTCATGCCATTGACGAAAGATCGATGCTTAGTAATCTCTAGTTAAATGGACCTGATGCATGACCGATGTAGTTGCGATCTATGCAGAACCT
TGGTCAATGTGCGTAGATTCTATCGAAAGTCGACTAGCTGCTGTCAAGAATATGGCAATCGAGACGTAGTGCAATAAACATGGCTTCGACGTACACTTTG
CTCTCAGACTTTTGTGTAGTTTACATCCTCTTATGAATACAGTATTCGATATTGAAGCAGGGAGCAGATATGATATCACATAATAGAGAGTTAGAACTAC
CATTCAATTTAGAGTTAGCTAGAGTACACATATACGACTACTATGCCATATAAGCTAGCATACTATCAAATTACTGTGACTGACGATATCTAACAATGAT
ATTGTTCTGTTGCTAATACAATATACATATTACTCTAGAATAATGTAATTTGAGTCTAAATGGACTTAGGAATGTCTGTATGTAGCCATTTTGGAGAAAC
AACTCCTTAACGATCAATGCATAGCGTATAATAATCATAATAGATTCAAACAATAATACAGATATAATATATACACATAAAATTGAACAAAATCCACCTT
ACACACTTGTACTCACTAGCACACAACAACAATTAAACACTACAGAATGCTCAAGAAATATCTGCTCATACTGAATATAATATCTAAATCTTCATATATC
AACGAGCACAAATCACCGATATCTGCCTCTGTGCACTGTTGTGTCAGTTGTGACTCTCATTACAATATATTTTCTACTCTGATTCAAATGATCATGAGAT
TAACAGCTTACTCATAATCAACGAAATTATCTCATCAAGATCCACATTATCCTTATAGAGATAGCTTAAACAACAAACATGCAAAGTGGTTACATCTACA
GCGCTTATCGACTAACTTGCTATCTACTGACCTAGTATAATGTTCGACTCACGATAACAGACAACAGTTGCAACTATAGGGCTGCAAGTGATATCATGTA
CTATGAAATGATATATTGACTCACGACATTATGATGCATACAACATCGTCAAACTAGTATGGTTGCCCGAGATAAGAAATAGACTACGTAGGGTCTCACC
AAGACCGATATA
>LE_HBa0175B09_T7_124055 (trimmed for quality and cloning vector)
TCTGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.4086
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0175B09
Clone
Clone name
hba-175b9
LE_HBa0175B09
C03HBa0175B09
P175B09
Clone type
BAC
Contamination
none
Estimated length
116,604
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found