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Clone Read LE_HBa0001J06_SP6_127508

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001J06_SP6_127508
Primer
SP6
ID from Seq. Facility
Le-HBa001_J06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
684 trimmed for vector and quality, 1394 raw
Genbank Accession
Sequence
>LE_HBa0001J06_SP6_127508 (raw untrimmed)
CCCCTAATTGGTAGACCCTGGGCTGGCCGCCCTTTTTATGTCCTGTTTGCACATACAGACTTAAGGTATATGCAGTCCTCTTGCCTATACAATTCTTTTG
CAGGTGTTTGTTGCAAATCCAAACAAGCCTCGAGAAATAAAACTTATATTGGCAAAGAACCATGAAGGGTTATTGGCATTGCTAAACAACCTTGGAAAAG
GTAATACATATAAGTGTATAGGGTACAATTGCTCTTGAGATTTAGCATAAGTATGTTTATCAGTTCTCTGAATTATTCCGTTATCACAGGTGGTGAAGAC
GATCAATTTGAAGAAGAAAAGGAGCTGATTATGAAGGAAATAGAAAAGGTGTCTCGGTTGGAATCTTAAGTATATTACCTTTCTTTGCTTTTTTTTTGTG
ATTCATTCTCATTCTTTGAAGTTAAAAGAAAGGCCTCTGTGAGGGTGCTGCTTGCTCCAACATCATCTCCTTAGTCTAGAAAGAAATGTCATGTACTTAT
CTTCTGATCAAACCTACTTTTCTTAAATATAAGCTATAGAGTGGAATTTTTGTGCAGTCTATTGACTTGTGAGAAAAATCACCCTTTATAGATGAAAAGA
TTATCAAATGTTCATGGGTGTTATATTTCTGATGTTTATCAATCATCTTCTTTGTCCTAGCCATGCTTGCCTACTTGTCCATTTGCAACTAATACAAAAC
TAAAAATCTTCTTAAAGATAATTGATGGGATCTATTTTTAGTAATACTTTTCCCTCTTTAACATTTGTTTAAGTTGGTTCATTGTGTGAATGTGGTATGT
TTTGGCCATCCACCCAAACAAAGTAATGATACATTTTTGGCTATTATCCTCTTATAAAAATAGCTTTTAATCATAAAATAAAGTTGTGACCATGCCCAAC
TAGATAAATAAATGAAGCCCCCCCCTTTTTTTCTTTTTTCTTTTTTTTTAAAAAACAAAAACCATAATTGGAAATATTTTTTTCTTGCTCGAAAAAAGTT
CCCTCCGAAAAAAAAACTCTCCTTTCACCACTTGGGTAAATCCTGTTTTATTAAAAAAAGGTTCTGGTTTTTCGACCATCTGTGAAAGGTCTTTCCTGTC
CAATCAAATCAGTAAACATATGCCCCCCATCTTTGTCCTCATAAAAAGGATACTCTACATAAAAAAAATAACTTAAACTATCTCAAAAAAAGAGCCAGGA
TATATGAATTACACACAGTACTATATGATATTTATATGTGGTCTTATAACGAAAAGAAGGTAGATAAAGGGTGTGTCGCAATCATCTTGAAAATATTTCT
AGTTACCCGAAATCCCTCCTTTTAACATCGACGCGTTACACTCCGTAAGACTCTTAACAATCGATTAGTGCACTACCCCTGTATACACCGTAAT
>LE_HBa0001J06_SP6_127508 (trimmed for quality and cloning vector)
TGGCCGCCCTTTTTATGTCCTGTTTGCACATACAGACTTAAGGTATATGCAGTCCTCTTGCCTATACAATTCTTTTGCAGGTGTTTGTTGCAAATCCAAA
CAAGCCTCGAGAAATAAAACTTATATTGGCAAAGAACCATGAAGGGTTATTGGCATTGCTAAACAACCTTGGAAAAGGTAATACATATAAGTGTATAGGG
TACAATTGCTCTTGAGATTTAGCATAAGTATGTTTATCAGTTCTCTGAATTATTCCGTTATCACAGGTGGTGAAGACGATCAATTTGAAGAAGAAAAGGA
GCTGATTATGAAGGAAATAGAAAAGGTGTCTCGGTTGGAATCTTAAGTATATTACCTTTCTTTGCTTTTTTTTTGTGATTCATTCTCATTCTTTGAAGTT
AAAAGAAAGGCCTCTGTGAGGGTGCTGCTTGCTCCAACATCATCTCCTTAGTCTAGAAAGAAATGTCATGTACTTATCTTCTGATCAAACCTACTTTTCT
TAAATATAAGCTATAGAGTGGAATTTTTGTGCAGTCTATTGACTTGTGAGAAAAATCACCCTTTATAGATGAAAAGATTATCAAATGTTCATGGGTGTTA
TATTTCTGATGTTTATCAATCATCTTCTTTGTCCTAGCCATGCTTGCCTACTTGTCCATTTGCAACTAATACAAAACTAAAAAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951388
Expected error %
0.2319
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001J06
Clone
Clone name
hba-1j6
LE_HBa0001J06
P001J06
Clone type
BAC
Contamination
none
Estimated length
109,177
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found