Clone Read LE_HBa0001O06_SP6_127733

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001O06_SP6_127733
Primer
SP6
ID from Seq. Facility
Le-HBa001_O06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
601 trimmed for vector and quality, 1260 raw
Genbank Accession
Sequence
>LE_HBa0001O06_SP6_127733 (raw untrimmed)
GCCAAAGTGTGTTAGTACTAATTTCTCGAGGTTTGAAAATGAGAAAACTTGTGATAACAACATTCGAATTAATCAACCTTTTTTAAGGTTAAATAACGAA
CATAAAAGTAAAAAGAAACCTTTCTTAGAGAGAAAGCAAAGTCAATGACTTGGTTGTATTCACTTGCCAAAGAAATTGAAATACTATTTGCTTGTGCTTT
TTTCAAAAAGAAACAAAAACTAATCAAGATTGTGATAGAGTGATCGATACATATCTATCTATGATTCAGTAAGAACTCCAATGTAGACTTCGGACATCGA
GTGACAAATAAAAAAAATAACAACAATGTAATTCATATTTGGATGGGTTATTTACTTCTTTTTTTTTTTTTTTGTCGTTTAACTCTATAAATGACACATA
CATAGGTTGGACGGACCAGTAACAATACTTTGTTTCTTACATTACTACATGTCTATTAGCTCATAAAAACATTGTTATGATCCATACTCGAATTGACTTA
TAAATTCCTAAATGAGACGTATATAGATTGGACGGACCAATAATAAAATTCAATTTCTTATTATTATTACTATTTAGTATCACCTCATAACAACATTGGA
TTTCATATTTGAATTGATTATTTGCTTTTCTTTGGCTTTTAAATCACTAAATAGACATTCATAGGCCAGATGTGCAAAAATAAAATTTTAAAATAAAATT
CTTACTAACAAGGGAAAATTTTATGTATTCAATCATTTGAACCCCCTATGATTGAAAGTCCAAAATAATTAAAGGATTTATAATCTCTCCATGTTATCAT
TCAATTTTTTTTTTTTTTTCTTAAAAGAACCCAATATTCCAAAAATCCCTTATAATGGGCATAAAAAGAAATAAAAAAAAATTGAAATTTTAAAAAGGGA
AAATTATGGAAAGGGCAGAAATAAAAACACTTTTTTGAAATCCCAATTTAACCAGAACAATTCGAAAGAAAAAAGTTAATCTCTTTTTTTTTTGCCGAAA
AAGGCCGTTAAAAAAAAAGGAAATAAAAATAACTTTCCCTAATGTGTTCCCAACACATCTGTTCACATCCCACTCGTCGACAAAACAGCAAAGAAGAAAG
GGCGGGTTTCCCAAAATCCCAAGTGACGATATATTAATAAGGTGCTCGCACACAGACAGAAGGTAGACTGCTATATTCGAATGAAAATACGATGCAATTT
CTGATGCACTTTCCAGAGGAGGACATACAAAAAACGCCCGGGAACTCAAACAATGAAACA
>LE_HBa0001O06_SP6_127733 (trimmed for quality and cloning vector)
AACTTGTGATAACAACATTCGAATTAATCAACCTTTTTTAAGGTTAAATAACGAACATAAAAGTAAAAAGAAACCTTTCTTAGAGAGAAAGCAAAGTCAA
TGACTTGGTTGTATTCACTTGCCAAAGAAATTGAAATACTATTTGCTTGTGCTTTTTTCAAAAAGAAACAAAAACTAATCAAGATTGTGATAGAGTGATC
GATACATATCTATCTATGATTCAGTAAGAACTCCAATGTAGACTTCGGACATCGAGTGACAAATAAAAAAAATAACAACAATGTAATTCATATTTGGATG
GGTTATTTACTTCTTTTTTTTTTTTTTTGTCGTTTAACTCTATAAATGACACATACATAGGTTGGACGGACCAGTAACAATACTTTGTTTCTTACATTAC
TACATGTCTATTAGCTCATAAAAACATTGTTATGATCCATACTCGAATTGACTTATAAATTCCTAAATGAGACGTATATAGATTGGACGGACCAATAATA
AAATTCAATTTCTTATTATTATTACTATTTAGTATCACCTCATAACAACATTGGATTTCATATTTGAATTGATTATTTGCTTTTCTTTGGCTTTTAAATC
A

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.916234
Expected error %
1.1272
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001O06
Clone
Clone name
hba-1o6
LE_HBa0001O06
P001O06
Clone type
BAC
Contamination
none
Estimated length
85,830
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found