Clone Read LE_HBa0017P20_SP6_130923

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0017P20_SP6_130923
Primer
SP6
ID from Seq. Facility
LE_HBa_017_P20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
534 trimmed for vector and quality, 925 raw
Genbank Accession
DU050088
Sequence
>LE_HBa0017P20_SP6_130923 (raw untrimmed)
GTGGTAATTTCCTCAAAGTTAAGCGTGTTCCGCGTGAACTCATATTCTTCACGTTGATTAGCATACTTTTGTTGCTTTGGAACTTTGGGTAACTAAATCC
CACAGGGCTTTTTCTCCATAGATAGGAGATTCCTGAGCTGCAGAAGAATATGAAACTATGAAGCCATCAATATCCTATAGTGATGGCATCTCTCCAAAAT
ATTTTCTTTTGTACCTTCCTCGAGTTCTTTGAGACTGCAGATGGAACAAAAGTTAGATGTTTGATTTAAGTGTGAACTACCAAAAAAATTGGAGAGTAGA
ATTTACAAAATATTTGGAAAGAAAAATGCTTTATAGGAAAAAAACTCATATACTTACAAAAGGAGAGAAGATGTACTTGCTCTACAAATGAACATATGAA
CTAGCTGAATAGGTGATTCCAATTTGTTCATCTAGAACAAGAAGGTGGTTTCCCAGCTAACTGTAACTTGCTTGTTCACTCTGCATCGACGAAATCAATT
TTTTCTTAGAGTCAATAAGTCATTCCAAGACATATGTCAATTTCAACAAAAATATCTTCAATTTTATTTTCCCATTCTTCTTTCTTTGGGGCAAGAAGTT
CCTCATCGTCAAATCAGAATGTTAAAGGAAGTGTTCCTCTGACCGAAACTTTTTCCTTCTCTTCAGGAGAAGTTTGTTTATTTATGAACATCGTTATATT
TATTGAATTAACAATTAACTTCCAAAACCCAAACTCTTCAATTACCTTCATCTATTATTTTTGAATATCATTAGTTCAAATATCAAAACTTTTGCCTAAA
AATATGAAGGTGTATCAGGAGAAGTGGATGTTTGTTATCCCAATACTGCTTTTGGTACAAGAAAAACCCCTTTGTTTGAATTTAACTTATTTTCGCCTTT
CCCAAATATAAAACATTGGGATTCT
>LE_HBa0017P20_SP6_130923 (trimmed for quality and cloning vector)
ATTCCTGAGCTGCAGAAGAATATGAAACTATGAAGCCATCAATATCCTATAGTGATGGCATCTCTCCAAAATATTTTCTTTTGTACCTTCCTCGAGTTCT
TTGAGACTGCAGATGGAACAAAAGTTAGATGTTTGATTTAAGTGTGAACTACCAAAAAAATTGGAGAGTAGAATTTACAAAATATTTGGAAAGAAAAATG
CTTTATAGGAAAAAAACTCATATACTTACAAAAGGAGAGAAGATGTACTTGCTCTACAAATGAACATATGAACTAGCTGAATAGGTGATTCCAATTTGTT
CATCTAGAACAAGAAGGTGGTTTCCCAGCTAACTGTAACTTGCTTGTTCACTCTGCATCGACGAAATCAATTTTTTCTTAGAGTCAATAAGTCATTCCAA
GACATATGTCAATTTCAACAAAAATATCTTCAATTTTATTTTCCCATTCTTCTTTCTTTGGGGCAAGAAGTTCCTCATCGTCAAATCAGAATGTTAAAGG
AAGTGTTCCTCTGACCGAAACTTTTTCCTTCTCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935274
Expected error %
0.4194
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0017P20
Clone
Clone name
hba-17p20
LE_HBa0017P20
C01HBa0017P20
P017P20
Clone type
BAC
Contamination
none
Estimated length
148,468
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found