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Clone Read LE_HBa0020I13_SP6_132877

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020I13_SP6_132877
Primer
SP6
ID from Seq. Facility
LE_HBa_020_I13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
713 trimmed for vector and quality, 981 raw
Genbank Accession
Sequence
>LE_HBa0020I13_SP6_132877 (raw untrimmed)
TGGGAATTGGAGTTCTTGTTAGAGCACAAAGAAAGCTGCTAAGTCTACTCCGTTCCTCGTGGTGTTGCCTGTTTTAACCTTAACATTTCACAAGTATTGT
AAGAGTCGATTTGAACCTGCATTCAGAAAGTATCCCATTGAGGTAACCTTCACTTGCTAGTCATATATTACGTCTTTCTCAACACATTTCTGGCATATTA
ACACATGCTTCCGTTTCTTAATATTTCTCCGTGATGAATCTTGCAACCACTTCATTTAAAAGCTTTAGCTGACAGAGAGAACAACAACTTTTGTTTATTC
ATTATAGGGAACTTTGTCTGAAAGCTTAAGCGGATAGAGAGAACATCCACTAGTCTATGTACTTATATCGTCAACAAATAGTAAAGGAATAACATCTCAC
ATCTCATGATCATTTTCAGGAAGCAATGGAAAAGGACTTGCAAGACCGATCTTCTGAATCTGACGCCAACTTGAAAGCATACTTGGCTGATGCATATCTA
CATCCTATTTTCCACTCATTTGAAGAGATTGAACTGGAGGACGTTAAAATCGACAAAAAGCCTCCTCCTCACAGCCCCAGCCCCCCACTGAGTGAACTCA
GTTCTCCATCACCAACTCATGATGCCAAAGACCTCAAGGAAGTCGAGCCATCTGGGACGTCTCAAACATCTCACAACGTCCAGCACTATGAAGTCGGACA
ACCAGGGGACTTGTTTCACTATGAATATGAACAAACCAGTCATGTATATCACTATGATTACCAGTCACAATATCACCACGATTCGCAATATCAACATAGC
GGATATCATTATTAAGCCCGGTTTAATCCTTAGTTTGATTGATGTTAAGCAGCTTAATTGCCTTACCCCCTCACTTAAAACCGTTTAACATTTTGCAAAA
CAGGCCTGCCCTTCAATTAAAATTTTGTGCCCCCAATGGAAAAGCTTTTAATCCCTTAATTTTCCCCAAGTTTTTGAAAAG
>LE_HBa0020I13_SP6_132877 (trimmed for quality and cloning vector)
AGCACAAAGAAAGCTGCTAAGTCTACTCCGTTCCTCGTGGTGTTGCCTGTTTTAACCTTAACATTTCACAAGTATTGTAAGAGTCGATTTGAACCTGCAT
TCAGAAAGTATCCCATTGAGGTAACCTTCACTTGCTAGTCATATATTACGTCTTTCTCAACACATTTCTGGCATATTAACACATGCTTCCGTTTCTTAAT
ATTTCTCCGTGATGAATCTTGCAACCACTTCATTTAAAAGCTTTAGCTGACAGAGAGAACAACAACTTTTGTTTATTCATTATAGGGAACTTTGTCTGAA
AGCTTAAGCGGATAGAGAGAACATCCACTAGTCTATGTACTTATATCGTCAACAAATAGTAAAGGAATAACATCTCACATCTCATGATCATTTTCAGGAA
GCAATGGAAAAGGACTTGCAAGACCGATCTTCTGAATCTGACGCCAACTTGAAAGCATACTTGGCTGATGCATATCTACATCCTATTTTCCACTCATTTG
AAGAGATTGAACTGGAGGACGTTAAAATCGACAAAAAGCCTCCTCCTCACAGCCCCAGCCCCCCACTGAGTGAACTCAGTTCTCCATCACCAACTCATGA
TGCCAAAGACCTCAAGGAAGTCGAGCCATCTGGGACGTCTCAAACATCTCACAACGTCCAGCACTATGAAGTCGGACAACCAGGGGACTTGTTTCACTAT
GAATATGAACAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972653
Expected error %
0.1146
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020I13
Clone
Clone name
hba-20i13
LE_HBa0020I13
P020I13
Clone type
BAC
Contamination
none
Estimated length
102,556
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found