Clone Read LE_HBa0023D04_T7_134156

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0023D04_T7_134156
Primer
T7
ID from Seq. Facility
LE_HBa_023_D04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
10 trimmed for vector and quality, 869 raw
Sequence
>LE_HBa0023D04_T7_134156 (raw untrimmed)
GACCCCGTTATGCGGTACCAAAGGGTTCCTGCGGAATTCTTGTGATGCATAACGACTAGTGTTTGGGGTATGTTTTTATGAAATATGTAAATTCAGCATC
GTATGCTTCTATAGAACTGATGGTGCATGAAATTAAATATACAACTCAACATCTTGAGTGAGCGTCCGTACTG
TATTTATTTGAAATTATGGAGGCATTA
CTAGTATAGTGTTCATGTAGATATTCATACAGAACCTAAGAGTCTTCAATATATGTTAAAACTGAATAAGTTGAATCTCCGACCAAGAAGATGGTTGGAG
TTGTTGAAAGAAAATGACATGAGTGTGCCCTTCCACCCCGATATGGCCAATGTGTTCGAGGTATCCTTTTGAGGTTCAAGACCTTGTGAAATGTGTCTTA
CGTAGAATAGTGTGAGAAATGCCGGAGTAAAAATGTTCACACGTTCTGCAGATTTTGCGTCCAGCTGTAAGATTCTCAAACTGGTGAGCCTCCTTCCACT
TCAGCTTGACCCTTCACTCATCTCTTGCCTGTTTGACGGGTAATCTAAATTATACTCTATCTCCATTAATAGTTAGAAGACTTTCCGATTTATGTGCCCA
CACTACGACTTTCAAACCTCACTATCCAACTCGAGATGGGGCCTGTGCCTTCTTTATATCTCTTCCTACCTTACATCATGGCTTATATCCCCTTTTGCTA
TTGTATCATAAATCTTGCTCTTCTCATTCTACTTTTCTTCTCTTCCCATTTTCCTTTTCTTCCTTTTTTCTATTTACTCTTTAGTTTCAGATCATTCTTT
TTCATCTTCATTTTTTATTCCATCTTCAACCTCCTTTCTCTTTCGTCATCCTAACTTTCTTTTGTCAAT
>LE_HBa0023D04_T7_134156 (trimmed for quality and cloning vector)
TATTTATTTG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.2689
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0023D04
Clone
Clone name
hba-23d4
LE_HBa0023D04
P023D04
Clone type
BAC
Contamination
none
Estimated length
121,308
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found