Clone Read LE_HBa0031H12_SP6_139739

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0031H12_SP6_139739
Primer
SP6
ID from Seq. Facility
LE_HBa_031_H12-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
480 trimmed for vector and quality, 952 raw
Genbank Accession
DU048431
Sequence
>LE_HBa0031H12_SP6_139739 (raw untrimmed)
TAACAAAAAGTTTTAAGAATAGCAAATCAAATAAAACTAAAATAACGATAAAACCTCAGAGAAAAAAATAAAGAAAACTTAGAATGAAAAAAAATAACAT
TTCAAATTGAATTAACACGTGTCACACAATGATTGGTGTGTGATTACACTTGCCATTTAAAATGTGGAATTGATCCAAAAATAATGTAATAATATATGTT
CAGAATAGTTTAGGGGGTAAATGACATCTTCATAGTTTAGTTGTCTTTTTAAAAATTCGATACAACTTCATATGTCACTTTATGTCTTTTCTCATATATA
TATATGTGTGTGTGTGTGTGTGTGTGTTATCTTGCTACTACTCATACCTAAGAAAAAAATATTTACTTAGATTGCAAATAGAAAATTCAAGTAAAAATAG
AAAGACATTTTAATTAATAATAAATGCTAGTAGAAAGCTCCGTCTATATATATATGTGAAAATAATAACATATTATTTCTAATTTTCTATTTAGGCTATA
TAATAATAATAAATATGGATTAAAACTTGATATTAATCAAGTTTTATACTTTTAGTCTATATTTTTATATTAGGCATAACTCATCGCTGGTTCCCTAAAA
TTCCCATCATTTTTTCTCTTAAACTCCTCCACTTGGTTTTTGTTCATTTTTTCAACCTATTTTGTCACTTGACCTTTTTTGTGATCCTTCTCCTCTTCTG
CATCTCTTAACGTCTTCTCCTAATTTATTATGTGATTACCTTGTTATTCTGCTCTTATATAAAATTTGTCATGTTCCATGCTTCTGCTCTCCTCTCTCTT
CTCTTATTCTTTTATCCTGCCTTTGTCTATTCTTGTATCCTTTTGTATTTCTTCTTGTTTTTTTCTGTCTTCTACTCTTATTTTAAGACATACGTTTGGC
CTCCCGATCAGCGCTGTCACTCTCCCGTTGTCCCGCCCTCCCGTCCTCTTAC
>LE_HBa0031H12_SP6_139739 (trimmed for quality and cloning vector)
AAAAAAATAAAGAAAACTTAGAATGAAAAAAAATAACATTTCAAATTGAATTAACACGTGTCACACAATGATTGGTGTGTGATTACACTTGCCATTTAAA
ATGTGGAATTGATCCAAAAATAATGTAATAATATATGTTCAGAATAGTTTAGGGGGTAAATGACATCTTCATAGTTTAGTTGTCTTTTTAAAAATTCGAT
ACAACTTCATATGTCACTTTATGTCTTTTCTCATATATATATATGTGTGTGTGTGTGTGTGTGTGTTATCTTGCTACTACTCATACCTAAGAAAAAAATA
TTTACTTAGATTGCAAATAGAAAATTCAAGTAAAAATAGAAAGACATTTTAATTAATAATAAATGCTAGTAGAAAGCTCCGTCTATATATATATGTGAAA
ATAATAACATATTATTTCTAATTTTCTATTTAGGCTATATAATAATAATAAATATGGATTAAAACTTGATATTAATCAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.876217
Expected error %
0.3245
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0031H12
Clone
Clone name
hba-31h12
LE_HBa0031H12
P031H12
Clone type
BAC
Contamination
none
Estimated length
83,491
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found