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Clone Read LE_HBa0035G11_T7_141226

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0035G11_T7_141226
Primer
T7
ID from Seq. Facility
LE_HBa_035_G11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
600 trimmed for vector and quality, 963 raw
Genbank Accession
DU043725
Sequence
>LE_HBa0035G11_T7_141226 (raw untrimmed)
GTCAACCCGGGCCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAGGTTAACATCGAACAGGTTATTTTAGGGGTCACAATTTTTCAATT
GAACGTGCACTAATTTATTTTGTCAGCCAGCATCTGGTGCAGAACTCGAACAGCCTGTGCTCCAGCTGAATGTCCCACAAAATGAATAGGGTGATCTTCA
TCCCACTCGGGATAGTGCCCTGCTTCATTTTTTGTTAAGTGAAGCATTGATCCAGAAAAATAGAAATGTGATAGTCCTTTAATGGCTTAGTTTGACTGGC
ACAATGTTAAAGAAAGAACGATTTTTGAAACATGCGATCTTAAACATGTTATAACACGTGTGTGTCTATAAGCACTTGTCTTTCATTAGTATATAAGTGA
AAGTTCAAGTCAAACTGTTTCAAAATATACAAATGTGTAGTCATTTTCTTAACGGGACTTAACAGGAAATAATACCATTGGGAGTGAGTTATATATATGA
AGTAAAAATTTAACCTTGTTCATAAACTCGTCCAAAATGGGCATGTCCACTATCCTTGCTGTGTTCCTCCCCATAATCAACTTGCCCACCTTTCAAATAA
TAGAACAATTCACGAGCCCTGAAATCTAAAATCCATCAATTGTTGCAAAAAGTATAGAACAAGAAGAACAGTATAACTATGACATATGTGACAATCTCAT
CAAAAGTTTAACTTTTACGGAAAGCACACTTTTATTTATTTACTATTTTTTCGAAATACCCCTCATCTCGATATCTGGTAGTTCTAAACATATTAAGAAT
TCCTGAACTCCTCTATGCTCGTTTTAAAATCCTCTCTTTAATTGTTTTTCTCACACCTGTCCTTATTTCGTTCCGTTACTTCTATCTCTCCTTCTTATAA
GTAAATCCAATCGTTAACCATTACAAAATTCCTTTTCCACACCACGTTTCCTCACTTTCATTT
>LE_HBa0035G11_T7_141226 (trimmed for quality and cloning vector)
AGCTTGAGGTTAACATCGAACAGGTTATTTTAGGGGTCACAATTTTTCAATTGAACGTGCACTAATTTATTTTGTCAGCCAGCATCTGGTGCAGAACTCG
AACAGCCTGTGCTCCAGCTGAATGTCCCACAAAATGAATAGGGTGATCTTCATCCCACTCGGGATAGTGCCCTGCTTCATTTTTTGTTAAGTGAAGCATT
GATCCAGAAAAATAGAAATGTGATAGTCCTTTAATGGCTTAGTTTGACTGGCACAATGTTAAAGAAAGAACGATTTTTGAAACATGCGATCTTAAACATG
TTATAACACGTGTGTGTCTATAAGCACTTGTCTTTCATTAGTATATAAGTGAAAGTTCAAGTCAAACTGTTTCAAAATATACAAATGTGTAGTCATTTTC
TTAACGGGACTTAACAGGAAATAATACCATTGGGAGTGAGTTATATATATGAAGTAAAAATTTAACCTTGTTCATAAACTCGTCCAAAATGGGCATGTCC
ACTATCCTTGCTGTGTTCCTCCCCATAATCAACTTGCCCACCTTTCAAATAATAGAACAATTCACGAGCCCTGAAATCTAAAATCCATCAATTGTTGCAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.960664
Expected error %
0.7361
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g10740.2 Score 71 E Value 4e-13 Identity 77.80% Align. Length 501bp (83.50%) Frame 3
68414.m01226 expressed protein
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g10740.1 Score 71 E Value 4e-13 Identity 77.80% Align. Length 501bp (83.50%) Frame 3
68414.m01225 expressed protein
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
ref|NP_973806.1| Score 71 E Value 2e-11 Identity 28.70% Align. Length 107bp (17.83%) Frame 3
expressed protein [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF17667.1| Score 71 E Value 2e-11 Identity 28.70% Align. Length 107bp (17.83%) Frame 3
F20B24.17 [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0035G11
Clone
Clone name
hba-35g11
LE_HBa0035G11
P035G11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found