Clone Read LE_HBa0077H09_T7_18401

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077H09_T7_18401
Primer
T7
ID from Seq. Facility
LE_HBa_077_H09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1170 raw
Sequence
>LE_HBa0077H09_T7_18401 (raw untrimmed)
CAGAAATATGTATATACATCACAATGAGAGCAAGACACCTCCTCTTACACGCAATAGAGATGTCATCTCGCACTCTATAGAACAATAGACAGATAATGGA
TGCAATGNCTGTATGATATAACTGCAAGAATCCTCTCTTACATGCTAATNGCTGCTGNGACCTTAGGGTGATGTTCAACTTNCGATGAGCANTCTATAGG
ACACTAGATTGTCGANGACTGCACCGCTATCGTGCCAGACTGGTAGATATATGAGTAGTGGGACTGTTCTGCTAACGAACGCTACGACGTGTGTCTCTGA
AGTCAGCTGAAGACNATGACGAAAGANATAGCTATCAGCAGAGATCAGATAATCAGACTAGAGTGAAACCAGCTGCGAGAACAGTCAGACTAGTGTCTCC
CNCACTCTACCANATAGGCACGGAGCACTAGCGTCTGCTACACGCACCCGACCAGCGCAAGACTCATCTGAGCGAGCGCGCCCAGCGCATGGCTAGCTCG
TGCTCGTGACTTGATAGGAAGTACATAACGAGCGACACATAAATATCACAGTAAAATGCCACTGCTCATGGCACAGAGTAGCGGNGCGCGGGCCGAGNAC
AGAGATGAGTGTGTGGCGAGTTGCATGCGGCACTCTTCAGCTCATCGCCGGCGNTAGTAGGTGAGCGATGTGGCATGGTGATGACGACTGACCAACACGG
TGCGCACGCGCGCTCGCTCATCAGTACAGCANGCAGAACGNCCGCGCGNCTGCAACGCACGCCCANGGATTCCGAGATTGCGTCATGATTATATAGAGCG
CAGACACACACTGGCAATNACGACGTCTATAGAGAGTACTAGACAAGAGGCAGCCGCTATCGCTCATGATAGCTCGACACTTGTCCACCAACTACGTATA
CATTACAAGCGTGCGCACACAGGNGCGGNGACGGTACGCACGCGTTGCTGACAGAACACGACGAACGGAGCGAGACTCGGCGACCGCGAGCACGATGCCT
CCACATCAGCAGTACACTGTACCCCTATGACGAACCGAGCGGGGGCNCATAATNACTACCTCTAAGCGAATCTCATACTCCCNGTCTATACACCGCGCTC
AATATATCCTGTAAGCAGATAGTGTGTCTGACCACACCTACGGCACAAGCACGCGCAGAGCACCTGCACG
>LE_HBa0077H09_T7_18401 (trimmed for quality and cloning vector)
TC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.30601
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077H09
Clone
Clone name
hba-77h9
LE_HBa0077H09
C03HBa0077H09
P077H09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found