Clone Read LE_HBa0005J17_SP6_2000

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0005J17_SP6_2000
Primer
SP6
ID from Seq. Facility
LE_HBa_005_J17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
739 trimmed for vector and quality, 931 raw
Genbank Accession
Sequence
>LE_HBa0005J17_SP6_2000 (raw untrimmed)
AAAGGGGCNTCCGTTAGCTATTGATTATTTTTGCAGTGTTTGGGGTAATTATTTTTTATATAACTAATTCATGATACTTTGTTCTATTAAAAGTGTAATT
AAGTGACTTTTATGTATCATGTATATCTATTCAAACTTATGTATCATATATGCAGGAAACCATCAGACGATAAATACATATCAAAATCTTCTTCTTTTGA
ATTTACGATGATGGACTTTGTTGTTGCTTTTCCAATGAACAAGAATTGGTTCTATGCCATGTCACAGCCAAACGAATGTTGGTCTGATGAGGTAAAAATC
ATAAACTAATTATCAAATATGTATTAGTCAAACTTATATTATTATAGCATGATACATTCTATAGAAGTATCATACTATTTAATTAGCAAAATTTATGATC
AATTTTTAATAATTATATTTTTTATATTGTTTAGATGTATATAATTTCTTATTATGTTTTCATTTTGTTTATAGAACATCGATGTGATTTTTTACTACCT
TCATAAAAAATCAAAACTTTGTAGCATGGATCAATACAGATACACAACAACCCACTGCTTGTTCATATCACATGTAAAAAATTGTTATGATAGATATTAC
ATGGACAATGATGATGATAGTCTTAGTACACAAGAACATGTTGATCGTGCTTCAGTTGTATCTGTATAAGAGAGGTCAACAATTAACATCATCAAAGGTT
ATGGAATCCCACTGCTTTACCATGGCATCTCGCCGAGGAGGTCTACATCCCAATTAACTGAATACAAGAATTCCGTTGGGTGCTAGCAGTTGTTGAGTTG
AAAACAGGGTGATAAGAGTGTTTGACTCATTCATATGGAAAAAGCAATTTCTCATGAGAAAAAAAATGTTGTATAAAATGGGTTTCTTCTTTTCCTACCG
GGTATGGGTTGGGGAGACGGAAAACCGGGTA
>LE_HBa0005J17_SP6_2000 (trimmed for quality and cloning vector)
TTTTTGCAGTGTTTGGGGTAATTATTTTTTATATAACTAATTCATGATACTTTGTTCTATTAAAAGTGTAATTAAGTGACTTTTATGTATCATGTATATC
TATTCAAACTTATGTATCATATATGCAGGAAACCATCAGACGATAAATACATATCAAAATCTTCTTCTTTTGAATTTACGATGATGGACTTTGTTGTTGC
TTTTCCAATGAACAAGAATTGGTTCTATGCCATGTCACAGCCAAACGAATGTTGGTCTGATGAGGTAAAAATCATAAACTAATTATCAAATATGTATTAG
TCAAACTTATATTATTATAGCATGATACATTCTATAGAAGTATCATACTATTTAATTAGCAAAATTTATGATCAATTTTTAATAATTATATTTTTTATAT
TGTTTAGATGTATATAATTTCTTATTATGTTTTCATTTTGTTTATAGAACATCGATGTGATTTTTTACTACCTTCATAAAAAATCAAAACTTTGTAGCAT
GGATCAATACAGATACACAACAACCCACTGCTTGTTCATATCACATGTAAAAAATTGTTATGATAGATATTACATGGACAATGATGATGATAGTCTTAGT
ACACAAGAACATGTTGATCGTGCTTCAGTTGTATCTGTATAAGAGAGGTCAACAATTAACATCATCAAAGGTTATGGAATCCCACTGCTTTACCATGGCA
TCTCGCCGAGGAGGTCTACATCCCAATTAACTGAATACA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.923344
Expected error %
0.354424
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0005J17
Clone
Clone name
hba-5j17
LE_HBa0005J17
P005J17
Clone type
BAC
Contamination
none
Estimated length
108,010
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found