Clone Read LE_HBa0155H17_SP6_200805

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155H17_SP6_200805
Primer
SP6
ID from Seq. Facility
LE_HBa_155_H17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1279 raw
Sequence
>LE_HBa0155H17_SP6_200805 (raw untrimmed)
CTGTCTATATTACTCATATTATGACTATGTTATTATTATGATGTGGAGCGCGGAGAGGNGTCCGCGTCNGTCATACCANTGCTCTGCATCTCCATCTAGT
AGAGCGNGGCGCTATNGTTNNTGNGGAGATATNGGATATNTCATNNTCAGCGACACAGCGATCATCANACTANGGCANACGTATNATATAGAGAGTCGAG
AGATATNAGNATATNCGCTAAATACCCTCTAGANATAGGTNCNACACTAGAACGNANACTATNATGTTCTACTACGATNGTACGTNCCCAATACAAAGAT
ATTGAACGTAGCGACTACTGGTACTGTACACGAGCGCGCTCGATCGTATCTGTGCACTGTGTNGCGTGTCTTACTNCNACACCGACTGTGGNGATCGNGT
CTTAGTAAACATATGTAGTGCTCTGAATATGCANGTGCTAGATAGTGATACNATACATAGTACCACGTACGAACGACAGCAACTCANATTGCACTTATGA
CATATATACTAGATNGACGATTCCCTTGCGTANACCTGACGATATTAGATGTTGTTGCAGTAGCNATGACGCGTGCCGACTGGCTGGAGGCGACGCGAAT
GCTCGAGGCTGTGAGCTGCGCGCGCTGNCGCACAACACGATAGACCACAGCAGGCACACGGTCATGCACTATGGTCAAGAGGGCGACGACGTGTGCCCTN
GCTCTATATCTTTATTTATTTATATCTGCTCTTCTCCTATTCTGACTACATAGATGTATGCATGTGATTCTGACTTAAAGATGGNGAGTGTCTGCTGTCA
CATCTATTCTCAATTANACTCGAGTACTTATATCNTTACTCTTACTGCATTGATATCGGACAGTAATATCTGTCTGCGGCGTGTGTGATGGCTGNACTCT
ATCATTGAGAGTGGAGCTAGCCTGTTAGTGTATTNGTATAGGCTACGTGTTCTTGTGATCNGTGTGTGTCACTCGTACTTGTATCTCTGGTTAATTATAC
TATCATTGATGATNCTATATTTATANTAGACTTCCTATNTCTANCATACTTCGTAACTAAGTTATGCTGCTGATAATCTAGATCTANGCTCATATGTANT
AAATCTAGACAGACTTCAGGATGCTTCGACGCTTTATACAATACACAANCAATCATAATAGTAGGCAGTGNGCGCTTCCTCGCGTGCACCGTTCTTCCTG
TTGTGCTGCTTGAGAGCATCCGTATAATATTGAAGCACTCTGTTGCGTGTACATTATATTACTACACTACTGTATACAT
>LE_HBa0155H17_SP6_200805 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155H17
Clone
Clone name
hba-155h17
LE_HBa0155H17
P155H17
Clone type
BAC
Contamination
none
Estimated length
106,681
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found