Clone Read LE_HBa0155H17_T7_200806

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155H17_T7_200806
Primer
T7
ID from Seq. Facility
LE_HBa_155_H17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1247 raw
Sequence
>LE_HBa0155H17_T7_200806 (raw untrimmed)
TCCAATTACACACGGAGATAGACACGAAGAAACATGTGCTCTCTCTCTGATGACACGAGATGGATNGTGTATTNTAGCGCTGNCTCAGTATGCGTGCATC
ATNAGATTGAGTGAGTCTCTATCTNTNTCTATCAGATATAGTGGAGAGCTTATAAGAGCGACTAGTATGTGANAGACACATGACATCGCCTGATAATATG
TCTAGAATATGCATGAANATGATTCGATCATACTCTNANATACGAGTCAACAGATGAGTGTGTGTGTGAGCGCNACTACGCTTACTACTTAGCACGCGGA
GCNGACATCATTACCTCTAACGAGCTGCGCAAGCATGATACTGACGTCAGACACCNATGAGCNCTGTNCCCCTGTATTATGCACTATGCTATCTGCCGCA
CTNCACACATNAGCAACAANAGCTNANGTGCATGTCTCACNTCGGCGGCGTCGTCACTCTACATCATCGCCTCCCTCACTGACAGTGTTGTACACGATCA
TTGCTAGTCACTTACATGATCTCTAANCGAGCAGAGACGTAGTTACACAGACTACATCATTCATCGTCATCTCGTCNCTCTATACATCACTCTACAATGT
ACAAGATGATATCCATGAAANCATACATCAATATGCACCACTAAACACACNCGTATTCAAGACACGTGGCGCATAGACGATGCAATTACAGNGCATACAG
TGAACTCTGATGTGCAGCTGAGAAAGATCTCTACACTATACTTGTAGAGCTGTCTGGTCTCTCNCATGAACATGCACTTGAGTAGACAGCATGCTANGTC
GCATCGCTTCGAATCACGTGACGTAGATGCTGATCTATACTATCATCATCTGCTCATGCTCGACTACCAACTCCATCATCACACTACCACCAGCCAGTCA
GTCACTCCATCGATAAGCGGCGTANAATCAGTACTCAGACACGAGTATACTCAGTATNGATTACATAGACAGTATAACCATATAGAAGTAGTCACCTCAC
AGATCACCGCAACACAACTTCGAAACGAGCGCACATGAAGATTCAAATCCANAATCGTTGCACTATAGTCGNATTGATAATTACCATAGTTGCTANTACA
GTACCANTCANAATAGACGTCTGCACAANAGCTCACATGCTTCTGGCCTACGATATCGTGATAGATACTACAGATCAACATACTACAGTCATAGGGTNAN
GTTAGATATGATAGAGAGATCTTNAGATCGACATCGATACACTGAGA
>LE_HBa0155H17_T7_200806 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.944941
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155H17
Clone
Clone name
hba-155h17
LE_HBa0155H17
P155H17
Clone type
BAC
Contamination
none
Estimated length
106,681
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found