Clone Read LE_HBa0155J07_SP6_200881

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155J07_SP6_200881
Primer
SP6
ID from Seq. Facility
LE_HBa_155_J07-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
75 trimmed for vector and quality, 757 raw
Sequence
>LE_HBa0155J07_SP6_200881 (raw untrimmed)
CTGAATGGAGTTTCGCATATGAAGAGGGGGCCCTTCCNGACCGCCCTCTTTTGAGGGCGCCTNGGNCACATCTAGGGATAGAGAGGAGACCCCTACAGGG
ACTGAAGAGGTTTTTAGAGAGGGTCGTGAGAGGGAATACGAGCAGATTTAGGAGAAGAAAGCACCACCCTAACCCACTCAAAAGAGGATTAATCAGGTTC
TCACTTTCAGTGCTTTATCTGATCAGGTCCATACATCCCCACATTTTTCCATCAGCACCTCAGGCTAAAGGAGTACAAATTACATGTGTTGTGACTTCGC
GCTCGGTGCATGCACAAACATACATGATTACCCTATTGACTTCAGGGACTATAAGGATAAGTGACCTGTTGAAGGGCTTAAAAATATCTTTTTTTTTTTT
CTCCCCCCTTGATAGAATGTTATTTTTAAAAAAAGAGGGGGGTGTATGATTCGTTATTCACTTTTTAATTTACTTCGTCACTTGATTTTATGCTAATATA
TCATATATTAATATATAAATGAATGTTTCATGCACTACTATTTTTCTTATTTTTCTATCCTTTTCCTTACTAGATGATGCTGTGCTTGTTTTATTTCTTT
TCTTTTTTTTATTCTCTTTTCATTTAACTGATTTCTTTCTCTACTCTACTCCTCTCTTACCCTTCTCTTATATTCTCCCCATTCCCTACCCTCTCCAGCT
CTCTCACTTTCTTCTCTCTCGTCCTGTTTCATTGTTTTTTCATTATTTTTTGATTTA
>LE_HBa0155J07_SP6_200881 (trimmed for quality and cloning vector)
GAGGGAATACGAGCAGATTTAGGAGAAGAAAGCACCACCCTAACCCACTCAAAAGAGGATTAATCAGGTTCTCAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.879868
Expected error %
0.623791
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155J07
Clone
Clone name
hba-155j7
LE_HBa0155J07
P155J07
Clone type
BAC
Contamination
none
Estimated length
116,045
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found