Clone Read LE_HBa0079L01_SP6_20112

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0079L01_SP6_20112
Primer
SP6
ID from Seq. Facility
LE_HBa_079_L01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
263 trimmed for vector and quality, 824 raw
Genbank Accession
Sequence
>LE_HBa0079L01_SP6_20112 (raw untrimmed)
AAGTAAGGGCATATAGGTAAGGCCCTTTTTGGGTGANCCAGATTAAAACAAGAANNAGACTTTCCTCTTTCAGGGAACCCAACTTCCAATGGGCATAACT
TACTCATATGAACTTGGAATAGCGCAAACTCGGTGGCGTTTCAAAGATCATTCAGACGGCTACCCAACCGTACCCATGAGTTCTCCTAACTCATTCTGAA
CTAGAAGTTATGACCATTTGAGTTGACCAAAACACAATTTTTATAATTTAATTAAATTTCTAGATTATTTATTATTTCCATAAAAGAATATTTCTCGTTC
TTAACATCTTTCTGTCTATTTCGAACTGTGAGATGTCTCTTTTTCCAACTTAGGTAAATTTCCATGTTATTATTTTTGGAGTCAAATAATATAGATGTGA
CTTACATTTAATATCCATTTCCTTTCCTCTCGATGTGGCACGCATGGCATTTCACTGTTTTCTCACGAAAATTCTCGACCGTGCCACCACTTCTTTCTCC
ATCCTCTTTGAGTGTTTGCAGTCCATCTTCAACTGTCTCACCGGTCTATGTGACTTACTTCTATGGTTTTCTTCTTTGACAACTCGTGCTGCTTCGTGCG
TCGCTTATCTACCCTTCTCTTTGCCTCTTGTACCCCCCTCCCCCTCGTTCTTGCCATTCATATCACATACCTACTGCGTACTTTGTAGCTTGTGTATAGT
GAGGTATTAAGTTTTGCCGTTTTGCTTTCGATCCCTTCACCTCTGCTCCCATCCGTTGTGTCCGTGGCACCCCGGCTGACATACGGTATGTCGTACTTAT
TTACAACGGCTTCGAATGGCACCG
>LE_HBa0079L01_SP6_20112 (trimmed for quality and cloning vector)
CCCAACTTCCAATGGGCATAACTTACTCATATGAACTTGGAATAGCGCAAACTCGGTGGCGTTTCAAAGATCATTCAGACGGCTACCCAACCGTACCCAT
GAGTTCTCCTAACTCATTCTGAACTAGAAGTTATGACCATTTGAGTTGACCAAAACACAATTTTTATAATTTAATTAAATTTCTAGATTATTTATTATTT
CCATAAAAGAATATTTCTCGTTCTTAACATCTTTCTGTCTATTTCGAACTGTGAGATGTCTCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.939502
Expected error %
0.423946
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0079L01
Clone
Clone name
hba-79l1
LE_HBa0079L01
P079L01
Clone type
BAC
Contamination
none
Estimated length
79,555
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found