Clone Read LE_HBa0005K05_SP6_2024

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0005K05_SP6_2024
Primer
SP6
ID from Seq. Facility
LE_HBa_005_K05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
764 trimmed for vector and quality, 922 raw
Genbank Accession
Sequence
>LE_HBa0005K05_SP6_2024 (raw untrimmed)
CTACTGTGCATATAAAGCAGTAATCAATAGTATATAATTTAAATATACTAATAAATTAACCTGAAATATTGTTAGGCCACGACTCCAGTGCTCCTTGACA
TATGCTCCCATTGTTGTGTATGTCTGGATTGAGGAAAAATTTGTCTAAATCCTTAGTTGCACGACTCTTCACTTTTGGTGTCCCGTTGCAAGTGAAAAAC
TTTTTTATTTTCATAATTAATTATACATAAAAACATACGATTAGGTTTAGACACAGAGTTATGAATAGAAAAGACTAATAAGTTGGAATGATTTAGAAAA
TGCTACACCAAATTCCTTGAGATAAAGCGTTACTGGTAATTAGAGGGAGTTATAATTAGTTCTCCCTCCAAAAATTTTGAGATTTTTATTCCAATAAATT
CTAGAAAATATTTAGCGTTAGACTTAGCTAGAGGAATTGTGTCCCTACCTAATTCCTAACAATTGTCTGCCTAGATTTTGAAGTCAAAACGTTCGCTAGG
AAATACAGTCTTTCCTTGTAATTTCATAGATAAGGTCATATATAGCTAGGAATTTTAGATTCATAGCTAACATCAGTGTTATGCGGAATTCGAGATAATA
CGAGAAAATATAAATGCGAAAAACAAGACAACAGATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGGGGGAGCAGTTTTATTATAGAG
AGGCAAAAACAGAATTACAGAATAGGGTTTGCCATAGCGTCTATATATAGTGCTGAACTACGCCCTAACAGGCTTGGGCCCAAAATACAGAATTGACAGA
TAATTAAGGGGCCCAACTGACCCCCGTTCTTTCTATTGTAACGGGTCCGATTCAAGGCATTTCACCAATTTCCCCCTTTGACTTGAATTTTTCCAAACAA
ATTTCTTCCAAACCCACCTATG
>LE_HBa0005K05_SP6_2024 (trimmed for quality and cloning vector)
AGTAATCAATAGTATATAATTTAAATATACTAATAAATTAACCTGAAATATTGTTAGGCCACGACTCCAGTGCTCCTTGACATATGCTCCCATTGTTGTG
TATGTCTGGATTGAGGAAAAATTTGTCTAAATCCTTAGTTGCACGACTCTTCACTTTTGGTGTCCCGTTGCAAGTGAAAAACTTTTTTATTTTCATAATT
AATTATACATAAAAACATACGATTAGGTTTAGACACAGAGTTATGAATAGAAAAGACTAATAAGTTGGAATGATTTAGAAAATGCTACACCAAATTCCTT
GAGATAAAGCGTTACTGGTAATTAGAGGGAGTTATAATTAGTTCTCCCTCCAAAAATTTTGAGATTTTTATTCCAATAAATTCTAGAAAATATTTAGCGT
TAGACTTAGCTAGAGGAATTGTGTCCCTACCTAATTCCTAACAATTGTCTGCCTAGATTTTGAAGTCAAAACGTTCGCTAGGAAATACAGTCTTTCCTTG
TAATTTCATAGATAAGGTCATATATAGCTAGGAATTTTAGATTCATAGCTAACATCAGTGTTATGCGGAATTCGAGATAATACGAGAAAATATAAATGCG
AAAAACAAGACAACAGATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGGGGGAGCAGTTTTATTATAGAGAGGCAAAAACAGAATTAC
AGAATAGGGTTTGCCATAGCGTCTATATATAGTGCTGAACTACGCCCTAACAGGCTTGGGCCCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950076
Expected error %
0.140331
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0005K05
Clone
Clone name
hba-5k5
LE_HBa0005K05
P005K05
Clone type
BAC
Contamination
none
Estimated length
67,584
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found