Clone Read LE_HBa0174C19_SP6_202489

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0174C19_SP6_202489
Primer
SP6
ID from Seq. Facility
LE_HBa_174_C19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
601 trimmed for vector and quality, 787 raw
Sequence
>LE_HBa0174C19_SP6_202489 (raw untrimmed)
GTTCAACGCCCAACGTGCTTAGTCTCCCCGACTTCCTCTTGGGCTTTCTCTTCCTTTCTCTCACGGAGGCCATACCAATCCTTTTCAGTTCAGGGCATCT
TTTGTAACCACGCAGCCCTTTGCATATGAAGCAACCATCCTTGGAATCCTTTACCGTGTTGCCATGATCACCGGGCTTCTTGCCGCTGAACCCGTAGGTG
TGACGCCTCTTGGGTTGTGGCCCTTGCTCCTAGCCTTCGCCACTGTCTTCCCCACTATCATCATGACTGCCCACCTCGTCGTCCTCATCGGCACTAAAAG
ACTTCTCTTGCCTGAAGTCTGTCAAGGCTTCAGGCTGCGTGATGGTGTCGTCTATAGTCCTGACTTGCCGCAGTTCCAAATCCGTTCTGGCCCAATTTTG
CAGCCCATCCATGAAGTAGAACAATGCGTCGTCGTCCCTGAGGTTGGGAATCTGAAATGTAAGGGTGGTAAACTCCCGCACATACGCGCGTATGCTGCCC
TTCTATCTCAACTCCTGCATCTTCCGCTTTGCCTTATACACAACGTTGCTAGGGAAGAACTCCTTCTTGAACTCCACACGAAACTGCTCCCATGTGTTCC
ACGCGCATGTCCCCTTTGCGATGTCAGACTCTTTACACTTCCACCATAGCATGGCAGACTCCGAAAGATACAACATAGTCGTGTTTTATCTTGTTCACTC
ACTACGAACCCTTGCCACACTTTACGTTTTTTTTTAGTGCCTATAAAATTATTCCCCTTCTTGTCGCTCTTTGATCCCCTTTAATTG
>LE_HBa0174C19_SP6_202489 (trimmed for quality and cloning vector)
TCCCCGACTTCCTCTTGGGCTTTCTCTTCCTTTCTCTCACGGAGGCCATACCAATCCTTTTCAGTTCAGGGCATCTTTTGTAACCACGCAGCCCTTTGCA
TATGAAGCAACCATCCTTGGAATCCTTTACCGTGTTGCCATGATCACCGGGCTTCTTGCCGCTGAACCCGTAGGTGTGACGCCTCTTGGGTTGTGGCCCT
TGCTCCTAGCCTTCGCCACTGTCTTCCCCACTATCATCATGACTGCCCACCTCGTCGTCCTCATCGGCACTAAAAGACTTCTCTTGCCTGAAGTCTGTCA
AGGCTTCAGGCTGCGTGATGGTGTCGTCTATAGTCCTGACTTGCCGCAGTTCCAAATCCGTTCTGGCCCAATTTTGCAGCCCATCCATGAAGTAGAACAA
TGCGTCGTCGTCCCTGAGGTTGGGAATCTGAAATGTAAGGGTGGTAAACTCCCGCACATACGCGCGTATGCTGCCCTTCTATCTCAACTCCTGCATCTTC
CGCTTTGCCTTATACACAACGTTGCTAGGGAAGAACTCCTTCTTGAACTCCACACGAAACTGCTCCCATGTGTTCCACGCGCATGTCCCCTTTGCGATGT
C

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973524
Expected error %
0.953152
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD13304.1| Score 90 E Value 4e-17 Identity 9.30% Align. Length 548bp (91.18%) Frame 3
polyprotein [Lycopersicon esculentum] pir||T17459 polyprotein - tomato
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0174C19
Clone
Clone name
hba-174c19
LE_HBa0174C19
P174C19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found