Clone Read LE_HBa0174C19_T7_202490

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0174C19_T7_202490
Primer
T7
ID from Seq. Facility
LE_HBa_174_C19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
701 trimmed for vector and quality, 783 raw
Sequence
>LE_HBa0174C19_T7_202490 (raw untrimmed)
CCTCGGACCCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATAAAAGAAATGCGCGATCAACCTTTTCCTAGCAATGCATCTTGGCTTGCA
AGGGATAAATTGAAATAGGTTAAGGCAGACGGGTTCAGTGAGGGAATATATAAAAGAATTTACCTCTGTGATGTTAGACATACAAAATATGTCTGATGAG
GATAAACTTCACAATTTCATTTCGGGCATGCAAGGCTGGGCTCAAAACGAACTACGAAGGCAGAATGTTAAAGATATGCCTGGGGCAATTGCTGCTGCTG
ATTCGTTGGTAGATTTCCGGACGACTCGTCCTTCGACAGATGTCCCTTCTACTTCGAAAAATAAGAAAAAGAATGAAAAGAAAGGGGAATGGAGAAAGGA
TAGTCGTAAAAAGAATGCAAACGATAAAGGAAAGGCACAAATGAAGGATGGGAAAGACAGACCCAAGGGTAAAGATGGAAACTCTAAAGGGTGTTGGACT
TGTGGTGGTCCTCATTTGGCCAAATCTTGTCTAAACCGGGAAAAAGTGAATGCTTTGCTTGCTGGTAATGTGAATCAAAGGGAGGAGGATGAAGAAATAG
TGGCTGCAATGGCTAACCCATTGGGATTGTCCTTCAATCACATTATGGGGATCAATAATGTTGGAGAGATCTCTAGCACTTCCAATCCTCATGCTTCCTT
AATTCATATAGAAATGAAAATGAAGGAACAATGTGTGATGGCAATGGTTGATACAGGGGCCCCCACACTTTTGTAGATGTAAA
>LE_HBa0174C19_T7_202490 (trimmed for quality and cloning vector)
AGCTTATAAAAGAAATGCGCGATCAACCTTTTCCTAGCAATGCATCTTGGCTTGCAAGGGATAAATTGAAATAGGTTAAGGCAGACGGGTTCAGTGAGGG
AATATATAAAAGAATTTACCTCTGTGATGTTAGACATACAAAATATGTCTGATGAGGATAAACTTCACAATTTCATTTCGGGCATGCAAGGCTGGGCTCA
AAACGAACTACGAAGGCAGAATGTTAAAGATATGCCTGGGGCAATTGCTGCTGCTGATTCGTTGGTAGATTTCCGGACGACTCGTCCTTCGACAGATGTC
CCTTCTACTTCGAAAAATAAGAAAAAGAATGAAAAGAAAGGGGAATGGAGAAAGGATAGTCGTAAAAAGAATGCAAACGATAAAGGAAAGGCACAAATGA
AGGATGGGAAAGACAGACCCAAGGGTAAAGATGGAAACTCTAAAGGGTGTTGGACTTGTGGTGGTCCTCATTTGGCCAAATCTTGTCTAAACCGGGAAAA
AGTGAATGCTTTGCTTGCTGGTAATGTGAATCAAAGGGAGGAGGATGAAGAAATAGTGGCTGCAATGGCTAACCCATTGGGATTGTCCTTCAATCACATT
ATGGGGATCAATAATGTTGGAGAGATCTCTAGCACTTCCAATCCTCATGCTTCCTTAATTCATATAGAAATGAAAATGAAGGAACAATGTGTGATGGCAA
T

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.961877
Expected error %
0.467116
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD13304.1| Score 365 E Value 1e-107 Identity 87.60% Align. Length 696bp (99.29%) Frame 1
polyprotein [Lycopersicon esculentum] pir||T17459 polyprotein - tomato
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0174C19
Clone
Clone name
hba-174c19
LE_HBa0174C19
P174C19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found