Clone Read LE_HBa0089B22_SP6_25050

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0089B22_SP6_25050
Primer
SP6
ID from Seq. Facility
LE_HBa_089_B22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
687 trimmed for vector and quality, 842 raw
Genbank Accession
Sequence
>LE_HBa0089B22_SP6_25050 (raw untrimmed)
GCCAAAGCTTTGGGAGTTCGTACGGGGTGATAAAAGGATAAAGACTTCGATTCACGAAGAANATTTCTGGTGAAATGCACAATAGCACTCAAATTATAGC
CCGAAATGAGCAACACGAAGAAGTAGATTATGGACTATTTGATCATATGATAAGTAAATACAAGCCATCGCCAAAGAAGGGCTGTAAGAATCAGTCACCT
GTTTACGATTGGAAGGATACTGAGACCGGGGATATTCAGCAGGCTTCAAGTTCAGCGGAAATGTCTATTCATAAGTTAAAATTGGCATCCATATTAGAAG
CTATCGGCAGTCAAATTCATCGAGAAGATGGGGATTCAAAGAGGAGTTCCATTAAGAATGATCAGCTTGATGAGATCAGTTTACAAGTGCTTCAGACGAG
TGCTAAAGCATTTATCGATCAAATGTTCATAGACAGGAAGTATATCAGCAAAGGTAACATGAGCTATGAGCCCGAACAGTTTTCCAATGCATTAGAGATG
TTAAATTCAAATGGAGATTTGTTTCTGAAACTCCTACAAGATCCGAATTCACTCTTAGCTAAGCAAATCCGAAACATGCAAAACGTGCAAATGGCTAGAG
ATTCGATCAAGTCCTTCATGAGTAACAGACTACCAGACTGTAACATTTCAAAGAGTGAACATAAGCATCATCAATCTGCATTCGAAGAAAGTTCCAACTC
CCGGCCTTCAAATAAAATAGTTGTTCTGAAGCCGATTCTAGAACTGTTCGATGTTCTGAAAATGTTTACCTGCTATTGCTCGTCTATCCAGTCTCATATA
GCACAAGTAGTAAGGGGGGAAATTGCGCCCAAGATCTTTTCT
>LE_HBa0089B22_SP6_25050 (trimmed for quality and cloning vector)
AAGACTTCGATTCACGAAGAANATTTCTGGTGAAATGCACAATAGCACTCAAATTATAGCCCGAAATGAGCAACACGAAGAAGTAGATTATGGACTATTT
GATCATATGATAAGTAAATACAAGCCATCGCCAAAGAAGGGCTGTAAGAATCAGTCACCTGTTTACGATTGGAAGGATACTGAGACCGGGGATATTCAGC
AGGCTTCAAGTTCAGCGGAAATGTCTATTCATAAGTTAAAATTGGCATCCATATTAGAAGCTATCGGCAGTCAAATTCATCGAGAAGATGGGGATTCAAA
GAGGAGTTCCATTAAGAATGATCAGCTTGATGAGATCAGTTTACAAGTGCTTCAGACGAGTGCTAAAGCATTTATCGATCAAATGTTCATAGACAGGAAG
TATATCAGCAAAGGTAACATGAGCTATGAGCCCGAACAGTTTTCCAATGCATTAGAGATGTTAAATTCAAATGGAGATTTGTTTCTGAAACTCCTACAAG
ATCCGAATTCACTCTTAGCTAAGCAAATCCGAAACATGCAAAACGTGCAAATGGCTAGAGATTCGATCAAGTCCTTCATGAGTAACAGACTACCAGACTG
TAACATTTCAAAGAGTGAACATAAGCATCATCAATCTGCATTCGAAGAAAGTTCCAACTCCCGGCCTTCAAATAAAATAGTTGTTCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970359
Expected error %
0.588344
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0089B22
Clone
Clone name
hba-89b22
LE_HBa0089B22
C08HBa0089B22
P089B22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found