Clone Read LE_HBa0196I06_T7_258655

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196I06_T7_258655
Primer
T7
ID from Seq. Facility
LE_HBa_196_I06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
584 trimmed for vector and quality, 987 raw
Genbank Accession
Sequence
>LE_HBa0196I06_T7_258655 (raw untrimmed)
NNGGTATGGTCGGGGATCTCTGAGTCGACTNAGGCATGCAGCTTTGTATACTTAAGTAAGTTTTCCGCTTGTAGTCAGCCAGGATGAGGGTTCACTTGGG
GAACAGAAATGGTCTTCGAGTGTCGGCCACGTCCAGGGTGTAGGCTCGATCGTGACAAACTTAGTATCAGAGCACAGAGTTCAAGAGTCATACGATGTCT
ATGAAGTCGTGTCAAGTAGGAACTTATTTATGGTTGTGAGGGTCCCACTTTTATGAATCACGGACTACAGATATATAAGAAAAATTTTATTATTTCATAA
TCTTAATCGTGAAAAAAAAGCTAAGTTATAGATATATATTTTAACTCGTGTGTTTTCATATTCATTTGACTATCAATCATACTAGAGGTAGTTTAAAAGT
AAAGTTTAAGATCCTTATCCAAAGAATGGCAAAATGAGTGTAACATCCCGTATCCAAAGCAGACCAAACACCAGTTTTTCAAAAAATATGCAGGTGCAAC
AGACGGTGACCATCGACGGAACGTAGCCTACCCACGGTTCGTCCTACACATTCGTCGATGGAGTCAGAGACCCCAAAAATCTCAGCGCAGGAAAATTTGA
CCAAGTGTCGAATGATGGATGGACCAATAGTCCGTAGGTCAAACCCTGATCCGTAGTCTGTATCGAATCGATCAACACTACATTTACCCATTATCTGACA
GGAACCACGATTGGACCGCACGGTCTGTATATGGCACCTACGAACCATAGGTCTTGCCAAAGGTGAAAAAAAGAAATTAGTTTAGGGGGAAAAAGGTAGT
TGGGTTTACTTCCAAAGGATCATTAATTCCCGGCCCCAAAATGAATTAGGGGGTCCCCTGACCTTTCCAAAATTTTAAATTATTGAAAATGCCTTTTCCC
CCGCCCCCCAAATTCAAACCTTCCGAGAAAAAACTTTAGTCCCCCTTTTACCCAAAGGGCTGGGCGAAATGGGCCCCAACCTTGGGA
>LE_HBa0196I06_T7_258655 (trimmed for quality and cloning vector)
AGCTTTGTATACTTAAGTAAGTTTTCCGCTTGTAGTCAGCCAGGATGAGGGTTCACTTGGGGAACAGAAATGGTCTTCGAGTGTCGGCCACGTCCAGGGT
GTAGGCTCGATCGTGACAAACTTAGTATCAGAGCACAGAGTTCAAGAGTCATACGATGTCTATGAAGTCGTGTCAAGTAGGAACTTATTTATGGTTGTGA
GGGTCCCACTTTTATGAATCACGGACTACAGATATATAAGAAAAATTTTATTATTTCATAATCTTAATCGTGAAAAAAAAGCTAAGTTATAGATATATAT
TTTAACTCGTGTGTTTTCATATTCATTTGACTATCAATCATACTAGAGGTAGTTTAAAAGTAAAGTTTAAGATCCTTATCCAAAGAATGGCAAAATGAGT
GTAACATCCCGTATCCAAAGCAGACCAAACACCAGTTTTTCAAAAAATATGCAGGTGCAACAGACGGTGACCATCGACGGAACGTAGCCTACCCACGGTT
CGTCCTACACATTCGTCGATGGAGTCAGAGACCCCAAAAATCTCAGCGCAGGAAAATTTGACCAAGTGTCGAATGATGGATGGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970494
Expected error %
0.257359
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196I06
Clone
Clone name
hba-196i6
LE_HBa0196I06
P196I06
Clone type
BAC
Contamination
none
Estimated length
90,562
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found