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Clone Read LE_HBa0090G19_SP6_26052

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0090G19_SP6_26052
Primer
SP6
ID from Seq. Facility
LE_HBa_090_G19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 742 raw
Sequence
>LE_HBa0090G19_SP6_26052 (raw untrimmed)
AAGACAGGCGCCCCCCCCTCTTCAAAAGGGGGGAATAGATAGGGATGGAATAGGATGAGGAGAGTGAGATAGTTGTTGATGTAAATAATAATTTAANAAT
GTAGTGGGTGGAGATAATAGTAGGAAAAAAGTTTAAATGATNGTAGTGAGTATATTGGAGTGTTGAATTGGAAAGAGTGTGGTAGGGTGTTGTNTGTAAT
ATTATGTATAATGTGAAGTATTTGTGATGTTTTTGATGTGAGGTGAGTGTGGAGGGGGGAATATTGAGGATGTAAGTGGGGAGGTTAGGGAAGATATAGT
AATTTTAGGTGTGAATGAGTTGTGAATTTATGAGGGAGGTGTATGGAGGGTGGGGGGAAATAAAGTTAGTTGTAAAAATAAATGTAAAATAGGATATGTA
AGAATTTTGTGATATTAATGTGAGAGAATGAAATTTTAGGATGGAGGGATGGGGGTATGGTGGTATTGATTAGATTTTAATTTTTGTTTAAGTTAGTGGG
TATTTTTGTATTAAGAGGGTGAGAGTAATAAATTGAAGTTTTGATTTAGTTGAATTAGTAATTGAGTGTGAGTGGGGGAGTGATTGTAATTATAAGTTAT
AGTTATAAGTGTTTAATGATAGGTATAAATGATATAAAAATGGGTATATGTAATTATATGTTTGTTGTATATATAAAATGATGATATTTATTATGAGTGG
AAATTTTAATGTTGGGTAGGGATTTGTGTGTTGTGTAAATGG
>LE_HBa0090G19_SP6_26052 (trimmed for quality and cloning vector)
TGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.06257
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0090G19
Clone
Clone name
hba-90g19
LE_HBa0090G19
P090G19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found