Clone Read LE_HBa0165L19_SP6_262807

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0165L19_SP6_262807
Primer
SP6
ID from Seq. Facility
LE_HBa_165_L19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1449 raw
Sequence
>LE_HBa0165L19_SP6_262807 (raw untrimmed)
ACCCGTGAAACTTGGTTTGCATATGCCGTTCCCCACTGCTCGTTCTCCTACCATGGTAGCATCTCTTTCGCCGCTGGCATGTCATCAAAATCCAGTCGTG
TCTTTCACTTTACTCCCTTATGGGGAGGCAACTCCTCTCATAGTAGGTAGGTAACTTGATGATAGATGAGTCACTCTACACTGTCACAGTTTCTTGGTAC
TATATGCCGAGCACCATATCTCATCTAATCAGACGGGCACGAATTCATCTATGATTGCTGTCTCCTTTCCCGACGTGAAAACTTTCCAGACTACTGAAAT
TCAGACTTAGGCTCTTCCAGTCAATGACATCCCACTACATTTACCAAATCTATAACCTTGCTATTACTGACCTCCTCAACGTAACCGTTCGCTCATATCC
TTCTAGGTGATATTCCAAAATAACATAATCTAACTGTATAATCTTGTGCCCGGTGTAGCCAATAATTCCTTGATCTCCACTGAACTCACGCCCGGTCTAC
ATACATTACCCCTCTTTCTAAAACTTTTGCGAACCTTATCTCCGAATATTCCCCAAAATGCTCTCATTCACATTGGTAAATCCTGCGATATGCTTCGTAC
CAGTTACGCTCAGAACATTATCTATATTGTCTCCTTAGACTTCCCTTCGTATCATCTAGGTCGGCTAACGCTCCTCCCCAAAATCTGTCATCTATCTATG
TCATTACTGACACGATCATGATACAATAAATATATGTGATCTATCACTTTGCTCAACTGTGTCGTTGGACTCAACGCTCGTGATCCGTGTAAGAGCCTCC
ACCCATCCTTCTTTCTCACTACGTTGTATCGTCCATATGCTATTTCGTTAACATGTTCTGGACTATACACGTAAGTTCAATTTCACTGAGTTGTCTCCTC
TCTTACATTTCCATCTTATCTGTAATCTGCTGAACATTCCGTCCCTGACATGTTTGGCATGCTATCTAATGTACCTGCTACATGTACTACGTATCTCATT
AAGTGCACTCCCTATTGTGCAATTCTGCCACTCAAATCGGAACGACGGTAATTTGTCATTCTATTCACATAGTTTCTCATTGTGTTAATCACTTAATCTC
AGTCGTGTCTTTATCATTGATATACATCATTCACAGTCAGTGCTGGCACAGCCCTACCTAGTCATACCGATACCCTGACTATTTAATTCCAGATCTTGAT
CTAGTCTTTGCTCCACGCTCATTTACGCCTTCAGCCCCTGTCACCTGTCTCTATCTTTCGACTGTCTGCATCGATGTGGCCTTACTTTTGCTCGCCTACT
CTTGTCTCTACCCCTTCTCTTTCGTCCAACAACTTCTGTCGCTGATATCACTGCCCAGCTATTACTGTTCTTCAGTTCACTACATCTCTCGACGTTAGAT
TGTGTCATAAATGATGTGTCTATCGTCCACCTTCCACTTTGTCTATGCG
>LE_HBa0165L19_SP6_262807 (trimmed for quality and cloning vector)
ATC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.960136
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0165L19
Clone
Clone name
hba-165l19
LE_HBa0165L19
P165L19
Clone type
BAC
Contamination
none
Estimated length
120,252
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found