Clone Read LE_HBa0096D22_SP6_28986

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0096D22_SP6_28986
Primer
SP6
ID from Seq. Facility
LE_HBa_096_D22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
696 trimmed for vector and quality, 840 raw
Sequence
>LE_HBa0096D22_SP6_28986 (raw untrimmed)
GGGGCCGAATTCTAGAAAAAGGAGTATGAAAGACCAAGAACGGCTAGCCCAGTCAGTCTGCCTTGAATAGAAGGATTAGGAGATGTTCCATTTTAAATTG
TGTTTGGATTTAGAATTTTTTTTTTTGTCTTTGCAATAAATGTATTTATTGGCATTTTTTCAGAAAACAGTTGTTTTTCTGATTCAGATTTTGTGGAAAT
GATTTTAGTTGTCTTTTAGAGAGTATAATTATACTTACTAAACTTTTTTTGAGGCATTCATATGGGTGGATATTTTTTATATACAAATCAAATTGATATT
TTACAATTTACACCAATGTGTAAAAAGCTATTATATTCAATAAAAAGTTTATCAAACCTACTAAACGTCTTCCAATGTTACAAAATATATCTCCTAGTAG
TGTCTTTTATTGAAGAAAAGAAACAAGTTTCCGAATTTAGAGGAGAAAAGACTATGGTTCAAATTGCAATTCACAAAAGCTGAAATGAGGGCACCCAAAG
GAAAAAAGGTTGACCCACTGTTTCTGAAACAAAAAGCACCCTCTATGGTTCTTCTATATAAAGTAGCCCAAGCTTCTTTCCATATTCAACGAATTGCACC
TCTAAAGAACAACTTGGGGCTGCTTTCTAAGCAAACAGGCCTCTTTTCCATATAGAAACGACTCCTCATCTCACAAGACAACTAGCATTACCCATTAGTT
CAGATATTATAAGTTACCTTCTATACCTTAGTCCATTTTCCACCAGTAATTGTAACCAAACCAGGATGTTTTTTAGTGACAATTTGATCCCCGGAGATGC
TCGCGCATCAACTTGCCTTGGGGTCCATTTGCTAAGGGCG
>LE_HBa0096D22_SP6_28986 (trimmed for quality and cloning vector)
AAGACCAAGAACGGCTAGCCCAGTCAGTCTGCCTTGAATAGAAGGATTAGGAGATGTTCCATTTTAAATTGTGTTTGGATTTAGAATTTTTTTTTTTGTC
TTTGCAATAAATGTATTTATTGGCATTTTTTCAGAAAACAGTTGTTTTTCTGATTCAGATTTTGTGGAAATGATTTTAGTTGTCTTTTAGAGAGTATAAT
TATACTTACTAAACTTTTTTTGAGGCATTCATATGGGTGGATATTTTTTATATACAAATCAAATTGATATTTTACAATTTACACCAATGTGTAAAAAGCT
ATTATATTCAATAAAAAGTTTATCAAACCTACTAAACGTCTTCCAATGTTACAAAATATATCTCCTAGTAGTGTCTTTTATTGAAGAAAAGAAACAAGTT
TCCGAATTTAGAGGAGAAAAGACTATGGTTCAAATTGCAATTCACAAAAGCTGAAATGAGGGCACCCAAAGGAAAAAAGGTTGACCCACTGTTTCTGAAA
CAAAAAGCACCCTCTATGGTTCTTCTATATAAAGTAGCCCAAGCTTCTTTCCATATTCAACGAATTGCACCTCTAAAGAACAACTTGGGGCTGCTTTCTA
AGCAAACAGGCCTCTTTTCCATATAGAAACGACTCCTCATCTCACAAGACAACTAGCATTACCCATTAGTTCAGATATTATAAGTTACCTTCTATA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.941197
Expected error %
0.252226
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0096D22
Clone
Clone name
hba-96d22
LE_HBa0096D22
C11HBa0096D22
P096D22
Clone type
BAC
Contamination
none
Estimated length
125,379
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found