Clone Read LE_HBa0097M11_T7_30165

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0097M11_T7_30165
Primer
T7
ID from Seq. Facility
LE_HBa_097_M11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
474 trimmed for vector and quality, 818 raw
Sequence
>LE_HBa0097M11_T7_30165 (raw untrimmed)
CCGGGTCCCGGGGGTATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCTAGCTTGTACTGGATCGTCCTCTTTTTGTCTTGATGCCTTGAAGTTTTGGA
GTTGACTAGCACCTTTTTATGTTTAGTTTCTTAGATACTCTGAGCATTAATCATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGAT
AATGATAAATTTGAGTATTAGAATTAGATTATTGATTTAGTTGATGAGTTTCACCTCCTCCATATTGTGTGAATCAAGAATTTCTTATTTTACTTTGACT
TGTGACAACATATACAAACGATATATATATATATATACATATATATATATATTTATAGATCTCTACACATCCTGATATTTTGAGTGACTTTTACAGTATC
TCTCAAAATATCTATATAACTGATACCAATATAGACCACCATAAAACAGTGTGTTTTACAATCTATACATCCGGAGCTCTCTTATTCACTTACTTACCCT
TTTCTATTCAAGGATATAGTAACTGTCTTGCTGTTTATTGTGTCCAAAAATACTTCACTCACCAAATCAATTACGAGTCTTAAAGATTTAGATGGCAAGA
AACTCTCTCAACACAATCTCGTTACTAGGATTAACCACTTGATCTGCCAACCTTGTGTATACATTTTTCGCCCATACAACACCAGGTTTCAATAAACGCT
AAAGTCTAATTAGCTCTAAAAGTAAAACTTCATTTTATTAACATATCTTTACATCATTTTTAGATGTTGTTTTTCATCTTCTACCACAAAATAGAACATC
GTCCATCCCTTGAGATTA
>LE_HBa0097M11_T7_30165 (trimmed for quality and cloning vector)
AGCTTCTAGCTTGTACTGGATCGTCCTCTTTTTGTCTTGATGCCTTGAAGTTTTGGAGTTGACTAGCACCTTTTTATGTTTAGTTTCTTAGATACTCTGA
GCATTAATCATTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATGATAAATTTGAGTATTAGAATTAGATTATTGATTTAGTTG
ATGAGTTTCACCTCCTCCATATTGTGTGAATCAAGAATTTCTTATTTTACTTTGACTTGTGACAACATATACAAACGATATATATATATATATACATATA
TATATATATTTATAGATCTCTACACATCCTGATATTTTGAGTGACTTTTACAGTATCTCTCAAAATATCTATATAACTGATACCAATATAGACCACCATA
AAACAGTGTGTTTTACAATCTATACATCCGGAGCTCTCTTATTCACTTACTTACCCTTTTCTATTCAAGGATAT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.910097
Expected error %
5.83464
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0097M11
Clone
Clone name
hba-97m11
LE_HBa0097M11
P097M11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found