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Clone Read LE_HBa0099L08_T7_31647

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0099L08_T7_31647
Primer
T7
ID from Seq. Facility
LE_HBa_099_L08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
389 trimmed for vector and quality, 917 raw
Sequence
>LE_HBa0099L08_T7_31647 (raw untrimmed)
CTAGACCTGACCCCGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGCCCTTATTTTACTACTTTCCCCTCACGGTCCCCCTTTAAAGATAATA
ATACTTTTTTAGCTCCCTTCAATGGATCAGGGGAATGTAGGGTAAAATCAAGCATAGACTATAGACTTTTTTCCCACCTTTGGTTTATCGCCTAGACTCA
CCACTTTACTCTCTTTTATTTCGCCCACTATTCATTTATTCCTATCTCCTTGCTATTCTTCCCTTCTTTCTCCCTTTATCTAAGTGACTCACAACATTCC
AAGCTCGAAATTCAGGTATGTCTCTTACTGCACTTTACGATCTACCGATTCTAAGAGTCAATTTACTTTTGTTCTTTCTCTCTCTTTATACATTCAACCC
CAATTTTCAAAACATTCTTCATACTATCCACCCTCAAAAACATGGCGTTAGCCATCGATCAAAATACTTCATATCCTTATTTAGTTCTCGGCTGTGTAAA
GGTTCTTTACTGTTATTTATCTACCCTGCACGAATGCTTTTTGCATAAGCCGAACTGCCCATGTCACAAGAGGGACCAGGGCATGCACTCTATTCTATGA
TAATATCAGATTGGGAGAAAAACATTGGTCAATTATAGCCTCTAATCATTTGTAACACATAATGAGTAATTTCGTGTGCCTTTTTAGGTTTAGCTGAACA
TGGAGTATTTCTAACCCACACCCTTTTATCCTTTTACCCCCTGTCACTCCCATCATACATAAAAGTGATTTAAAAAGTTCCTTCGAAGCTCACTAGTTCG
AATATAAAACCTCATCTTCCTCAACGTGTGTTGCTTTCCTTTTTCTTCCAATGGTAAAATCGTCCATGTTTGCTTAAAATTACATTTTTTTTTCTTTTTT
TTCCTTTCATTTTTTTT
>LE_HBa0099L08_T7_31647 (trimmed for quality and cloning vector)
AGCTTGCCCTTATTTTACTACTTTCCCCTCACGGTCCCCCTTTAAAGATAATAATACTTTTTTAGCTCCCTTCAATGGATCAGGGGAATGTAGGGTAAAA
TCAAGCATAGACTATAGACTTTTTTCCCACCTTTGGTTTATCGCCTAGACTCACCACTTTACTCTCTTTTATTTCGCCCACTATTCATTTATTCCTATCT
CCTTGCTATTCTTCCCTTCTTTCTCCCTTTATCTAAGTGACTCACAACATTCCAAGCTCGAAATTCAGGTATGTCTCTTACTGCACTTTACGATCTACCG
ATTCTAAGAGTCAATTTACTTTTGTTCTTTCTCTCTCTTTATACATTCAACCCCAATTTTCAAAACATTCTTCATACTATCCACCCTCA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.91538
Expected error %
5.71408
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0099L08
Clone
Clone name
hba-99l8
LE_HBa0099L08
C12HBa0099L08
P099L08
Clone type
BAC
Contamination
none
Estimated length
64,856
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found