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Clone Read LE_HBa0103A08_T7_32655

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0103A08_T7_32655
Primer
T7
ID from Seq. Facility
LE_HBa_103_A08-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
46 trimmed for vector and quality, 845 raw
Sequence
>LE_HBa0103A08_T7_32655 (raw untrimmed)
CCCCGGTACCGAGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGTTGGTTTAGCTAGCTATTCCCATGAAGGGGGCCAAGGGATNCNCNNCCA
NNGCNNCCCAAGTCTTTAAGGGGACAAAACAGAANGNNCCANNAGNANGGNNGGACGAAGGNGAGGAAAGCNNGCAGNAACNCAAGACCGGGGGGACGAC
NGCACCAAGCCGGACCGGGCCAGGGGAAGGGAAAAAGNNCGNNGGCGAGGGNGAGGCAGCCGAGGCAGGGAGGGGAGCCGCGCNAAAGCAAGAGAAGAAC
GCAAGCGCCCAGGCGGCGAGGCAACGAAAGGCGCACGAACGAAACAAACCGACCCAAGAAGAGGAGAAGGCAGCGGGAGAAGAAGCACGAAAGCAAGGGA
GACACGAACCAAACGGGGCGAAGCGAGAAACAGACACGGAACAGCGGGGCCGACAGGAAGGGCAGACCCAAAAGGAGGGGAAGACAGAGACCGAAGAAGA
AGGACGGAACGACGGCGAGGACACCCACAGCAGCACCGGGGAGCCACCGGGAAAAGGCAGAAGAGGAGGAGCGACCCCCGGCCAGAAGAGCAGGCGAGCA
CCGGGAAGCGCAACCAGCACGGAAAGAAGACAAGACCACCACAAGCACAGAAGCGGACACACAACAAAGAAGCCAACAGACGGGAGGACGCCAGAGCGAG
GAGCGGGACGCCGGGAGAAGAGAGCGAGAGCACAGCCACAGGGGAAGAGGGAACGACGACCGGGGAGACGACGCAGGGCAGGCAGGGGCAAAGCGGGGAG
AGGGGCGGAGCAGAGAGACCGAAGCGAGAGCGAGAGACCACCAAA
>LE_HBa0103A08_T7_32655 (trimmed for quality and cloning vector)
AGCTTTGTTGGTTTAGCTAGCTATTCCCATGAAGGGGGCCAAGGGA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.831871
Expected error %
5.07929
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0103A08
Clone
Clone name
hba-103a8
LE_HBa0103A08
C03HBa0103A08
P103A08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found