Clone Read LE_HBa0008E13_SP6_3288

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0008E13_SP6_3288
Primer
SP6
ID from Seq. Facility
LE_HBa_008_E13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
627 trimmed for vector and quality, 998 raw
Genbank Accession
Sequence
>LE_HBa0008E13_SP6_3288 (raw untrimmed)
AAAAAAAAAAGGGTTCTNCCGCTATTGAGNANNAANNNNGGACAAGCAGGACTCTCTTTTGAATTCTCCTTTTTTGGATGGTGGCTATATGGAAACATAG
AGTTCCTGTGGATGTTTTTATATTTTTTTGGAATCATAAATGTTATGATTTATGTCTTTATTTTAGAGTTCCTGTGAGGAAAACAATAGAACAGTTATTC
TTATCTATTTTTATTTTGAATTACTATGCTAGGGCTGTTGGATTGCCAAGTCCTTCGGTATATGTGAAACAGACTATATGAAGAAATGGTTGCATTTCAA
AGGTAGTAGTAGAGAGAAGTGAAGATGGTGTATCAAGCAATGTCTAACATTATTCTTTGGTTTCTATGAAAGAGAAGGAACACAATTTTACATGGAGGGT
TATATTCTAGTAACTAGGTTATTTGGGATATTCTACTATTTAAAAGTTTATTAGGTTAAGTTCAGCTTATCAAGTTTTCCTAATAATTGGACTCATATGG
TATGTCAATTAGAAAAGCGTAGACCTGTTTTTCATAGTAAAGTTGTGAGGTCGATTCCTCCTCCTGTAGGGTGGCTGAAATGTAATACTGATGGTGTGTA
AAGACGAAAAACAAGTCCTAGATCTGTTTCTTTTTGTGTGAGGAATCATGATGATAATCTATGGGAACCAAAGGTTTACAAATTGCTAATACATCTAATT
TAGTGGTTGAGGCGAACACTATTTGTGAAGGGCTTCATACTACTTAAAAAAAAAGTTCCCCCACATCCTCGTAAAAACAATTCACCATCCCTGGTGAACT
TATAAATGGAATAAGGAGGTTCTTGGAGTGCTGGAAGGAGTCAATGCTATAAATGGTTCAAAAGAAATGAAATTAAAGTACACCTTTTTAGGAGGAAAAA
ATCTGCTTATTTTTGGGGGTTTATTTCCTTGAGGGATCTTTCTTGGAAAAATTTTCAATCAAGGGGTAGTAACGTAATCATACTCCATGAGGGGTATN
>LE_HBa0008E13_SP6_3288 (trimmed for quality and cloning vector)
GCAGGACTCTCTTTTGAATTCTCCTTTTTTGGATGGTGGCTATATGGAAACATAGAGTTCCTGTGGATGTTTTTATATTTTTTTGGAATCATAAATGTTA
TGATTTATGTCTTTATTTTAGAGTTCCTGTGAGGAAAACAATAGAACAGTTATTCTTATCTATTTTTATTTTGAATTACTATGCTAGGGCTGTTGGATTG
CCAAGTCCTTCGGTATATGTGAAACAGACTATATGAAGAAATGGTTGCATTTCAAAGGTAGTAGTAGAGAGAAGTGAAGATGGTGTATCAAGCAATGTCT
AACATTATTCTTTGGTTTCTATGAAAGAGAAGGAACACAATTTTACATGGAGGGTTATATTCTAGTAACTAGGTTATTTGGGATATTCTACTATTTAAAA
GTTTATTAGGTTAAGTTCAGCTTATCAAGTTTTCCTAATAATTGGACTCATATGGTATGTCAATTAGAAAAGCGTAGACCTGTTTTTCATAGTAAAGTTG
TGAGGTCGATTCCTCCTCCTGTAGGGTGGCTGAAATGTAATACTGATGGTGTGTAAAGACGAAAAACAAGTCCTAGATCTGTTTCTTTTTGTGTGAGGAA
TCATGATGATAATCTATGGGAACCAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931971
Expected error %
0.208601
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0008E13
Clone
Clone name
hba-8e13
LE_HBa0008E13
P008E13
Clone type
BAC
Contamination
none
Estimated length
121,076
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found